General information
PDB ID 1U78
Title STRUCTURE OF THE BIPARTITE DNA-BINDING DOMAIN OF TC3 TRANSPOSASE BOUND TO TRANSPOSON DNA
PDB header DNA BINDING PROTEIN/DNA
Date 2004-08-03
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.69
Kind dna
Organism CAENORHABDITIS ELEGANS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1u78.pdb A BC 0
Biounits:
1u78.pdb1.pdb A BC 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
HTH_Tnp_Tc3_1 Family P34257_3-52 1.1e-31 1 CL0123 A 3 52 BC  H-Bb H-Mj L-Bb L-Mj L-Mn 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: Homeodomain-like
      Family: Recombinase DNA-binding domain
Transposase tc3a1-65 A 2 54 BC  H-Bb H-Mj L-Bb L-Mj L-Mn 
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: Homeodomain-like
      Family: Recombinase DNA-binding domain
Transposase tc3a1-65 A 55 104 BC  H-Bb H-Mj L-Bb L-Mn 
GO terms
Protein chains: GO type: GO description:
A=1-135 C nucleus
A=1-135 F DNA binding
A=1-135 P DNA integration
A=1-135 P DNA recombination
Sequences
Download file with secondary structure created by Stride  
1u78.pdb1.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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A (protein): 
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