General information
PDB ID 1XHZ
Title PHI29 DNA POLYMERASE, ORTHORHOMBIC CRYSTAL FORM, SSDNA COMPLEX
PDB header TRANSFERASE/DNA
Date 2004-09-21
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.7
Kind dna
Organism BACILLUS PHAGE PHI29
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1xhz.pdb ABCD EFGH 0
Biounits:
1xhz.pdb1.pdb A E 1
1xhz.pdb2.pdb B F 1
1xhz.pdb3.pdb C G 1
1xhz.pdb4.pdb D H 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
DNA_pol_B_2 Family P03680_49-477 4.4e-99 1 CL0194 A 49 477 E   
DNA_pol_B_2 Family P03680_49-477 4.4e-99 1 CL0194 B 49 477 F   
DNA_pol_B_2 Family P03680_49-477 4.4e-99 1 CL0194 C 49 477 G   
DNA_pol_B_2 Family P03680_49-477 4.4e-99 1 CL0194 D 49 477 H   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a/b)
  Fold: Ribonuclease H-like motif
    Superfamily: Ribonuclease H-like
      Family: DnaQ-like 3'-5' exonuclease
Exonuclease domain of phi29 DNA polymerase A 5 187 E -
Class: Multi-domain proteins (alpha and beta)
  Fold: DNA/RNA polymerases
    Superfamily: DNA/RNA polymerases
      Family: DNA polymerase I
phi29 DNA polymerase A 188 575 E -
GO terms
Protein chains: GO type: GO description:
A/B/C/D=1-575 F nucleotide binding
A/B/C/D=1-575 F DNA-directed DNA polymerase activity
A/B/C/D=1-575 F 3'-5' exonuclease activity
A/B/C/D=1-575 F DNA binding
A/B/C/D=1-575 F nucleoside binding
A/B/C/D=1-575 P DNA replication
A/B/C/D=1-575 P nucleic acid phosphodiester bond hydrolysis
Sequences
Download file with secondary structure created by Stride  
1xhz.pdb1.pdb:   [ download sequences in FASTA format ]
E (dna): 
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A (protein): 
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1xhz.pdb2.pdb:   [ download sequences in FASTA format ]
F (dna): 
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B (protein): 
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1xhz.pdb3.pdb:   [ download sequences in FASTA format ]
G (dna): 
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C (protein): 
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1xhz.pdb4.pdb:   [ download sequences in FASTA format ]
H (dna): 
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D (protein): 
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