General information
PDB ID 1XI1
Title PHI29 DNA POLYMERASE SSDNA COMPLEX, MONOCLINIC CRYSTAL FORM
PDB header TRANSFERASE/DNA
Date 2004-09-21
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.2
Kind dna
Organism BACILLUS PHAGE PHI29
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1xi1.pdb AB CD 0
Biounits:
1xi1.pdb1.pdb A CD 1
1xi1.pdb2.pdb B 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
DNA_pol_B_2 Family P03680_49-477 4.4e-99 1 CL0194 A 49 477 C   
DNA_pol_B_2 Family P03680_49-477 4.5e-99 1 CL0194 B 49 477   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a/b)
  Fold: Ribonuclease H-like motif
    Superfamily: Ribonuclease H-like
      Family: DnaQ-like 3'-5' exonuclease
Exonuclease domain of phi29 DNA polymerase A 5 187 C -
Class: Multi-domain proteins (alpha and beta)
  Fold: DNA/RNA polymerases
    Superfamily: DNA/RNA polymerases
      Family: DNA polymerase I
phi29 DNA polymerase A 188 575 C -
GO terms
Protein chains: GO type: GO description:
A/B=5-575 F DNA-directed DNA polymerase activity
A/B=5-575 F nucleotide binding
A/B=5-575 F nucleoside binding
A/B=5-575 F 3'-5' exonuclease activity
A/B=5-575 F DNA binding
A/B=5-575 P nucleic acid phosphodiester bond hydrolysis
A/B=5-575 P DNA replication
Sequences
Download file with secondary structure created by Stride  
1xi1.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
Click "SHOW" for view sequence
D (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
1xi1.pdb2.pdb:   [ download sequences in FASTA format ]
B (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2019

text