General information
PDB ID 1Y69
Title RRF DOMAIN I IN COMPLEX WITH THE 50S RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS
PDB header RIBOSOME
Date 2004-12-04
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.33
Kind rna
Organism DEINOCOCCUS RADIODURANS R1, ESCHERICHIA COLI
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CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1y69.pdb KU8 09 0
Biounits:
1y69.pdb1.pdb KU8 09 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
RRF Domain P0A805_20-183 2.5e-21 1 No_clan 8 33 111 0   
Ribosomal_L16 Family Q9RXJ5_7-130 8e-50 1 No_clan K 6 133 09   
Ribosomal_L27 Family Q9RY65_2-81 8e-36 1 No_clan U 2 81 09   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a+b)
  Fold: alpha/beta-Hammerhead
    Superfamily: Ribosomal protein L16p/L10e
      Family: Ribosomal protein L16p
Ribosomal protein L16p K 6 141 09 -
Class: All beta proteins
  Fold: Barrel-sandwich hybrid
    Superfamily: Ribosomal L27 protein-like
      Family: Ribosomal L27 protein
Ribosomal protein L27 U 2 85 09 -
GO terms
Protein chains: GO type: GO description:
8=1-185 C cytoplasm
K=1-141 C ribosome
K=1-141 F rRNA binding
K=1-141 F tRNA binding
K=1-141 F structural constituent of ribosome
K=1-141 P translation
Sequences
Download file with secondary structure created by Stride  
1y69.pdb1.pdb:   [ download sequences in FASTA format ]
8 (protein): 
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K (protein): 
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U (protein): 
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0 (rna): 
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9 (rna): 
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