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Composition of PDB entry and biounits
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File: | Protein chains: | DNA chains: | RNA chains: | No. of models: | Action: |
PDB entry: | |||||
pdb2fdh.pdb | A | B | 0 |
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Biounits: | |||||
2fdh.pdb1.pdb | A | B | 1 |
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Pfam domains
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Name: | Type: | Domain: | E-value: | Significance: | Clan: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
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Domain | 3.8e-56 | 1 |
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A | 18 | 210 | B |
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SCOP domains
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Classification: | Protein: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
Alkylated DNA repair protein AlkB | A | 15 | 214 | B | - |
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GO terms | ||
Protein chains: | GO type: | GO description: |
A=12-216 | F | DNA-N1-methyladenine dioxygenase activity |
A=12-216 | F | oxidative RNA demethylase activity |
A=12-216 | F | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen |
A=12-216 | F | cytosine C-5 DNA demethylase activity |
A=12-216 | F | ferrous iron binding |
A=12-216 | P | oxidative single-stranded DNA demethylation |
A=12-216 | P | oxidative single-stranded RNA demethylation |
A=12-216 | P | DNA dealkylation involved in DNA repair |
A=12-216 | P | RNA repair |
Sequences
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2fdh.pdb1.pdb:
[
download sequences in FASTA format
]
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B (dna):
Click "SHOW" for view sequence
A (protein):
Click "SHOW" for view sequence
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