General information
PDB ID 2HDD
Title ENGRAILED HOMEODOMAIN Q50K VARIANT DNA COMPLEX
PDB header TRANSCRIPTION/DNA
Date 1998-02-10
Experimental method X-RAY DIFFRACTION
Resolution (A) 1.9
Kind dna
Organism DROSOPHILA MELANOGASTER
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Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2hdd.pdb AB CD 0
Biounits:
2hdd.pdb1.pdb AB CD 1
Pfam domains
Name: Type: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Action:
Homeobox Domain 3.1e-21 1 CL0123 A 5 58 CD
Homeobox Domain 3.4e-22 1 CL0123 B 2 57 CD
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: Homeodomain-like
      Family: Homeodomain
Engrailed Homeodomain A N/A N/A CD  H-Bb H-Mj L-Bb L-Mn 
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: Homeodomain-like
      Family: Homeodomain
Engrailed Homeodomain B N/A N/A CD  H-Bb H-Mj L-Bb 
GO terms
Protein chains: GO type: GO description:
A/B=454-512 C nucleus
A/B=454-512 F RNA polymerase II distal enhancer sequence-specific DNA binding
A/B=454-512 F RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
A/B=454-512 P analia development
A/B=454-512 P imaginal disc-derived male genitalia development
A/B=454-512 P spiracle morphogenesis, open tracheal system
A/B=454-512 P anterior/posterior lineage restriction, imaginal disc
A/B=454-512 P posterior head segmentation
A/B=454-512 P posterior compartment specification
A/B=454-512 P anterior commissure morphogenesis
A/B=454-512 P ventral midline development
A/B=454-512 P gonad development
A/B=454-512 P segment polarity determination
A/B=454-512 P wing disc anterior/posterior pattern formation
A/B=454-512 P imaginal disc-derived female genitalia development
A/B=454-512 P neuroblast fate determination
A/B=454-512 P genital disc anterior/posterior pattern formation
A/B=454-512 P anterior head segmentation
A/B=454-512 P axon guidance
A/B=454-512 P trunk segmentation
Sequences
Download file with secondary structure created by Stride  
2hdd.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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B (protein): 
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