General information
PDB ID 2HOT
Title PHAGE SELECTED HOMEODOMAIN BOUND TO MODIFIED DNA
PDB header TRANSCRIPTION/DNA
Date 2006-07-16
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.19
Kind dna
Organism DROSOPHILA MELANOGASTER
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA WebPDA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2hot.pdb AB CD 0
Biounits:
2hot.pdb1.pdb AB CD 1
Pfam domains
Name: Type: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Action:
Homeobox Domain 4.1e-20 1 CL0123 A 5 58 CD
Homeobox Domain 2.2e-21 1 CL0123 B 2 58 CD
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B=453-513 C nucleus
A/B=453-513 F RNA polymerase II distal enhancer sequence-specific DNA binding
A/B=453-513 F RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
A/B=453-513 P trunk segmentation
A/B=453-513 P segment polarity determination
A/B=453-513 P analia development
A/B=453-513 P anterior head segmentation
A/B=453-513 P imaginal disc-derived male genitalia development
A/B=453-513 P genital disc anterior/posterior pattern formation
A/B=453-513 P anterior/posterior lineage restriction, imaginal disc
A/B=453-513 P axon guidance
A/B=453-513 P wing disc anterior/posterior pattern formation
A/B=453-513 P anterior commissure morphogenesis
A/B=453-513 P gonad development
A/B=453-513 P ventral midline development
A/B=453-513 P neuroblast fate determination
A/B=453-513 P posterior head segmentation
A/B=453-513 P posterior compartment specification
A/B=453-513 P imaginal disc-derived female genitalia development
A/B=453-513 P spiracle morphogenesis, open tracheal system
Sequences
Download file with secondary structure created by Stride  
2hot.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
Click "SHOW" for view sequence
D (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2017

text