General information
PDB ID 2A8V
Title RHO TRANSCRIPTION TERMINATION FACTOR/RNA COMPLEX
PDB header PROTEIN/RNA
Date 1998-11-08
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.4
Kind rna
Organism ESCHERICHIA COLI
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2a8v.pdb ABC DE 0
Biounits:
2a8v.pdb1.pdb A D 1
2a8v.pdb2.pdb B E 1
2a8v.pdb3.pdb C 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Rho_RNA_bind Domain P0AG30_51-118 4.4e-30 1 CL0021 A 51 118 D   
Rho_RNA_bind Domain P0AG30_51-118 4.4e-30 1 CL0021 B 51 118 E   
Rho_RNA_bind Domain P0AG30_51-118 4.4e-30 1 CL0021 C 51 118   
Rho_N Family P0AG30_5-47 5.2e-18 1 CL0306 A 5 47   
Rho_N Family P0AG30_5-47 5.2e-18 1 CL0306 B 5 47   
Rho_N Family P0AG30_5-47 5.2e-18 1 CL0306 C 5 47   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: LEM/SAP HeH motif
    Superfamily: Rho N-terminal domain-like
      Family: Rho termination factor, N-terminal domain
Rho termination factor, N-terminal domain A 1 47 -
Class: All beta proteins
  Fold: OB-fold
    Superfamily: Nucleic acid-binding proteins
      Family: Cold shock DNA-binding domain-like
Rho termination factor, RNA-binding domain A 48 118 D -
Class: All alpha proteins
  Fold: LEM/SAP HeH motif
    Superfamily: Rho N-terminal domain-like
      Family: Rho termination factor, N-terminal domain
Rho termination factor, N-terminal domain B 1 47 -
Class: All beta proteins
  Fold: OB-fold
    Superfamily: Nucleic acid-binding proteins
      Family: Cold shock DNA-binding domain-like
Rho termination factor, RNA-binding domain B 48 118 E -
Class: All alpha proteins
  Fold: LEM/SAP HeH motif
    Superfamily: Rho N-terminal domain-like
      Family: Rho termination factor, N-terminal domain
Rho termination factor, N-terminal domain C 1 47 -
Class: All beta proteins
  Fold: OB-fold
    Superfamily: Nucleic acid-binding proteins
      Family: Cold shock DNA-binding domain-like
Rho termination factor, RNA-binding domain C 48 118 -
GO terms
Protein chains: GO type: GO description:
A/B/C=1-118 C membrane
A/B/C=1-118 F ATP binding
A/B/C=1-118 F RNA-dependent ATPase activity
A/B/C=1-118 F helicase activity
A/B/C=1-118 F RNA binding
A/B/C=1-118 P regulation of transcription, DNA-dependent
A/B/C=1-118 P DNA-dependent transcription, termination
Sequences
Download file with secondary structure created by Stride  
2a8v.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
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D (rna): 
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2a8v.pdb2.pdb:   [ download sequences in FASTA format ]
B (protein): 
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E (rna): 
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2a8v.pdb3.pdb:   [ download sequences in FASTA format ]
C (protein): 
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