General information
PDB ID 2BGG
Title THE STRUCTURE OF A PIWI PROTEIN FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH A 16NT SIRNA DUPLEX.
PDB header RNA-BINDING PROTEIN/RNA
Date 2004-12-22
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.2
Kind rna
Organism ARCHAEOGLOBUS FULGIDUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2bgg.pdb AB PQRS 0
Biounits:
2bgg.pdb1.pdb A PQ 1
2bgg.pdb2.pdb B RS 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Piwi Family O28951_110-406 1.9e-59 1 CL0219 A 110 406 PQ   
Piwi Family 3.7e-46 1 CL0219 B 110 323 RS
Piwi Family 0.00000000007 1 CL0219 B 322 406 SR
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a/b)
  Fold: Ribonuclease H-like motif
    Superfamily: Ribonuclease H-like
      Family: PIWI domain
Hypothetical protein AF1318 A 93 408 PQ -
Class: Alpha and beta proteins (a/b)
  Fold: Ribonuclease H-like motif
    Superfamily: Ribonuclease H-like
      Family: PIWI domain
Hypothetical protein AF1318 B 93 408 RS -
GO terms
Protein chains: GO type: GO description:
A/B=1-427 C ribonucleoprotein complex
A/B=1-427 F RNA binding
A/B=1-427 F metal ion binding
A/B=1-427 P gene silencing by RNA
Sequences
Download file with secondary structure created by Stride  
2bgg.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
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P (rna): 
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Q (rna): 
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2bgg.pdb2.pdb:   [ download sequences in FASTA format ]
B (protein): 
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R (rna): 
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S (rna): 
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