General information
PDB ID 2BOP
Title CRYSTAL STRUCTURE AT 1.7 ANGSTROMS OF THE BOVINE PAPILLOMAVIRUS-1 E2 DNA-BINDING DOMAIN BOUND TO ITS DNA TARGET
PDB header TRANSCRIPTION/DNA
Date 1994-01-13
Experimental method X-RAY DIFFRACTION
Resolution (A) 1.7
Kind dna
Organism BOVINE PAPILLOMAVIRUS TYPE 1
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2bop.pdb A B 0
Biounits:
2bop.pdb1.pdb AD BC 0
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
PPV_E2_C Domain P03122_328-405 2.7e-25 1 No_clan A 328 406 BC  H-Bb H-Mj S-Bb L-Bb 
PPV_E2_C Domain 2.7e-25 1 No_clan D 328 406 BC
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a+b)
  Fold: Ferredoxin-like
    Superfamily: Viral DNA-binding domain
      Family: Viral DNA-binding domain
Papillomavirus-1 E2 protein A N/A N/A BC  H-Bb H-Mj S-Bb L-Bb 
GO terms
Protein chains: GO type: GO description:
A=326-410 C host cell nucleus
A=326-410 F nucleotide binding
A=326-410 F DNA binding
A=326-410 F sequence-specific DNA binding transcription factor activity
A=326-410 P transcription, DNA-dependent
A=326-410 P DNA replication
A=326-410 P regulation of DNA replication
A=326-410 P virus-host interaction
Sequences
Download file with secondary structure created by Stride  
2bop.pdb1.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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A (protein): 
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D (protein): 
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