General information
PDB ID 2C9L
Title STRUCTURE OF THE EPSTEIN-BARR VIRUS ZEBRA PROTEIN
PDB header VIRAL PROTEIN
Date 2005-12-13
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.25
Kind dna
Organism HUMAN HERPESVIRUS 4
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2c9l.pdb YZ AB 0
Biounits:
2c9l.pdb1.pdb YZ AB 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
bZIP_2 Family 0.00052 0 CL0018 Y 176 222 AB
bZIP_2 Family 0.00049 0 CL0018 Z 176 222 AB
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Coiled coil proteins
  Fold: Parallel coiled-coil
    Superfamily: Leucine zipper domain
      Family: Leucine zipper domain
Trans-activator protein BZLF1 Y 175 236 AB  H-Bb H-Mj 
Class: Coiled coil proteins
  Fold: Parallel coiled-coil
    Superfamily: Leucine zipper domain
      Family: Leucine zipper domain
Trans-activator protein BZLF1 Z 175 236 AB  H-Bb H-Mj 
GO terms
Protein chains: GO type: GO description:
Y/Z=175-236 C host cell nucleus
Y/Z=175-236 F sequence-specific DNA binding
Y/Z=175-236 F sequence-specific DNA binding transcription factor activity
Y/Z=175-236 P suppression by virus of host IRF7 activity
Y/Z=175-236 P transcription, DNA-dependent
Y/Z=175-236 P suppression by virus of host type I interferon production
Y/Z=175-236 P modulation by virus of host cell cycle
Sequences
Download file with secondary structure created by Stride  
2c9l.pdb1.pdb:   [ download sequences in FASTA format ]
A (dna): 
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B (dna): 
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Y (protein): 
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Z (protein): 
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