General information
PDB ID 2DPJ
Title STRUCTURE OF HPOLI WITH DNA AND DTTP
PDB header TRANSFERASE/DNA
Date 2006-05-12
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.3
Kind dna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2dpj.pdb A PT 0
Biounits:
2dpj.pdb1.pdb AD PTBC 0
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
IMS_C Domain Q9UNA4_320-439 0.00000000012 1 No_clan A 295 414 CPT   
IMS_C Domain 0.00000000012 1 No_clan D 295 414 BCT
IMS Family Q9UNA4_58-236 2e-46 1 No_clan A 33 211 PT   
Cdd1 Family 0.000016 0 CL0198 A 230 283 P
IMS Family 2e-46 1 No_clan D 33 211 BC
Cdd1 Family 0.000016 0 CL0198 D 230 283 B
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a+b)
  Fold: Lesion bypass DNA polymerase (Y-family), little finger domain
    Superfamily: Lesion bypass DNA polymerase (Y-family), little finger domain
      Family: Lesion bypass DNA polymerase (Y-family), little finger domain
DNA polymerase iota A 300 414 CPT -
Class: Multi-domain proteins (alpha and beta)
  Fold: DNA/RNA polymerases
    Superfamily: DNA/RNA polymerases
      Family: Lesion bypass DNA polymerase (Y-family), catalytic domain
DNA polymerase iota A 27 299 PT -
GO terms
Protein chains: GO type: GO description:
A=26-445 C nucleoplasm
A=26-445 F DNA-directed DNA polymerase activity
A=26-445 F metal ion binding
A=26-445 F damaged DNA binding
A=26-445 P DNA replication
A=26-445 P DNA repair
Sequences
Download file with secondary structure created by Stride  
2dpj.pdb1.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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P (dna): 
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T (dna): 
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A (protein): 
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D (protein): 
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