General information
PDB ID 2DRP
Title THE CRYSTAL STRUCTURE OF A TWO ZINC-FINGER PEPTIDE REVEALS AN EXTENSION TO THE RULES FOR ZINC-FINGER/DNA RECOGNITION
PDB header TRANSCRIPTION/DNA
Date 1994-06-06
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.8
Kind dna
Organism DROSOPHILA MELANOGASTER
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2drp.pdb AD BCEF 0
Biounits:
2drp.pdb1.pdb A BC 1
2drp.pdb2.pdb D EF 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
zf-Di19 Domain P17789_509-565 1.8e-06 1 CL0361 A 109 165 BC  H-Bb H-Mj S-Bb L-Bb L-Mj 
zf-Di19 Domain P17789_509-565 2e-06 1 CL0361 D 109 165 EF  H-Bb H-Mj S-Bb L-Bb L-Mj 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Small proteins
  Fold: beta-beta-alpha zinc fingers
    Superfamily: beta-beta-alpha zinc fingers
      Family: Classic zinc finger, C2H2
Tramtrack protein (two zinc-finger peptide) A 103 139 BC  H-Bb H-Mj S-Bb L-Bb L-Mj 
Class: Small proteins
  Fold: beta-beta-alpha zinc fingers
    Superfamily: beta-beta-alpha zinc fingers
      Family: Classic zinc finger, C2H2
Tramtrack protein (two zinc-finger peptide) A 140 165 BC  H-Bb H-Mj L-Mj 
Class: Small proteins
  Fold: beta-beta-alpha zinc fingers
    Superfamily: beta-beta-alpha zinc fingers
      Family: Classic zinc finger, C2H2
Tramtrack protein (two zinc-finger peptide) D 102 139 EF  H-Bb H-Mj S-Bb L-Bb L-Mj 
Class: Small proteins
  Fold: beta-beta-alpha zinc fingers
    Superfamily: beta-beta-alpha zinc fingers
      Family: Classic zinc finger, C2H2
Tramtrack protein (two zinc-finger peptide) D 140 166 EF  H-Bb H-Mj L-Bb L-Mj 
GO terms
Protein chains: GO type: GO description:
A/D=501-563 C nucleus
A/D=501-563 C polytene chromosome
A/D=501-563 C transcription repressor complex
A/D=501-563 F chromatin binding
A/D=501-563 F DNA-binding transcription repressor activity, RNA polymerase II-specific
A/D=501-563 F metal ion binding
A/D=501-563 F promoter-specific chromatin binding
A/D=501-563 F protein homodimerization activity
A/D=501-563 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
A/D=501-563 P branch fusion, open tracheal system
A/D=501-563 P branching involved in open tracheal system development
A/D=501-563 P chitin-based cuticle development
A/D=501-563 P compound eye cone cell differentiation
A/D=501-563 P compound eye corneal lens morphogenesis
A/D=501-563 P dorsal appendage formation
A/D=501-563 P dorsal trunk growth, open tracheal system
A/D=501-563 P myoblast fate specification
A/D=501-563 P negative regulation of transcription, DNA-templated
A/D=501-563 P ovarian follicle cell development
A/D=501-563 P peripheral nervous system development
A/D=501-563 P positive regulation of border follicle cell migration
A/D=501-563 P positive regulation of DNA binding
A/D=501-563 P positive regulation of transcription by RNA polymerase II
A/D=501-563 P R1/R6 development
A/D=501-563 P R7 cell development
A/D=501-563 P regulation of cell shape
A/D=501-563 P regulation of compound eye cone cell fate specification
A/D=501-563 P regulation of embryonic cell shape
A/D=501-563 P regulation of transcription by RNA polymerase II
A/D=501-563 P regulation of tube size, open tracheal system
A/D=501-563 P tracheal outgrowth, open tracheal system
Sequences
Download file with secondary structure created by Stride  
2drp.pdb1.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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A (protein): 
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2drp.pdb2.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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D (protein): 
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