General information
PDB ID 2EZF
Title SOLUTION STRUCTURE OF A COMPLEX OF THE THIRD DNA BINDING DOMAIN OF HUMAN HMG-I(Y) BOUND TO DNA DODECAMER CONTAINING THE PRDII SITE OF THE INTERFERON-BETA PROMOTER, NMR, MINIMIZED AVERAGE STRUCTURE
PDB header DNA BINDING PROTEIN/DNA
Date 1997-06-04
Experimental method SOLUTION NMR
Resolution (A) N/A
Kind dna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2ezf.pdb A BC 0
Pfam domains
No Pfam domains
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Peptides
  Fold: DNA-binding domains of HMG-I(Y)
    Superfamily: DNA-binding domains of HMG-I(Y)
      Family: DNA-binding domains of HMG-I(Y)
DNA-binding domains of HMG-I(Y) A N/A N/A BC  L-Bb 
GO terms
Protein chains: GO type: GO description:
A=80-89 C cytosol
A=80-89 C senescence-associated heterochromatin focus
A=80-89 C transcription factor complex
A=80-89 F ligand-dependent nuclear receptor transcription coactivator activity
A=80-89 F 5'-deoxyribose-5-phosphate lyase activity
A=80-89 F sequence-specific DNA binding transcription factor activity
A=80-89 F AT DNA binding
A=80-89 F DNA-(apurinic or apyrimidinic site) lyase activity
A=80-89 P transcription, DNA-dependent
A=80-89 P senescence-associated heterochromatin focus assembly
A=80-89 P base-excision repair
A=80-89 P negative regulation of chromatin silencing
A=80-89 P DNA unwinding involved in replication
A=80-89 P provirus integration
A=80-89 P nucleosome disassembly
A=80-89 P protein complex assembly
A=80-89 P virus-host interaction
A=80-89 P response to virus
A=80-89 P positive regulation of cellular senescence
A=80-89 P negative regulation of transcription, DNA-dependent
A=80-89 P negative regulation of cell proliferation
A=80-89 P initiation of viral infection
A=80-89 P oncogene-induced senescence
Sequences
Download file with secondary structure created by Stride  
pdb2ezf.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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A (protein): 
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