General information
PDB ID 2FCC
Title CRYSTAL STRUCTURE OF T4 PYRIMIDINE DIMER GLYCOSYLASE (T4-PDG) COVALENTLY COMPLEXED WITH A DNA SUBSTRATE CONTAINING ABASIC SITE
PDB header HYDROLASE
Date 2005-12-12
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.3
Kind dna
Organism ENTEROBACTERIA PHAGE T4
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2fcc.pdb AB CDEF 0
Biounits:
2fcc.pdb1.pdb A CD 1
2fcc.pdb2.pdb B EF 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Pyr_excise Domain P04418_2-136 7e-45 1 No_clan A 2 136 CD   
Pyr_excise Domain P04418_2-136 7e-45 1 No_clan B 2 136 EF   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: T4 endonuclease V
    Superfamily: T4 endonuclease V
      Family: T4 endonuclease V
T4 endonuclease V A 2 138 CD  L-Bb 
Class: All alpha proteins
  Fold: T4 endonuclease V
    Superfamily: T4 endonuclease V
      Family: T4 endonuclease V
T4 endonuclease V B 2 138 EF  L-Bb 
GO terms
Protein chains: GO type: GO description:
A/B=2-138 F deoxyribonuclease (pyrimidine dimer) activity
A/B=2-138 F hydrolase activity, acting on glycosyl bonds
A/B=2-138 P nucleic acid phosphodiester bond hydrolysis
A/B=2-138 P DNA repair
Sequences
Download file with secondary structure created by Stride  
2fcc.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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2fcc.pdb2.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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B (protein): 
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