General information
PDB ID 2FVQ
Title A STRUCTURAL STUDY OF THE CA DINUCLEOTIDE STEP IN THE INTEGRASE PROCESSING SITE OF MOLONEY MURINE LEUKEMIA VIRUS
PDB header TRANSFERASE/DNA
Date 2006-01-31
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.3
Kind dna
Organism MOLONEY MURINE LEUKEMIA VIRUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2fvq.pdb A B 0
Biounits:
2fvq.pdb1.pdb AD BC 0
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
RVT_1 Family P03355_760-932 8.4e-28 1 CL0027 A 101 273 BC  H-Bb H-Mn S-Bb S-Mj L-Bb L-Mn 
RVT_1 Family 8.4e-28 1 CL0027 D 101 273 BC
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Multi-domain proteins (alpha and beta)
  Fold: DNA/RNA polymerases
    Superfamily: DNA/RNA polymerases
      Family: Reverse transcriptase
MMLV reverse transcriptase A 24 278 BC -
GO terms
Protein chains: GO type: GO description:
A=683-937 C host cell plasma membrane
A=683-937 C membrane
A=683-937 C viral capsid
A=683-937 F aspartic-type endopeptidase activity
A=683-937 F zinc ion binding
A=683-937 F structural molecule activity
A=683-937 F ribonuclease H activity
A=683-937 F RNA binding
A=683-937 F DNA-directed DNA polymerase activity
A=683-937 F DNA binding
A=683-937 F RNA-directed DNA polymerase activity
A=683-937 P RNA-dependent DNA replication
A=683-937 P virion assembly
A=683-937 P DNA integration
A=683-937 P DNA recombination
A=683-937 P nucleic acid phosphodiester bond hydrolysis
A=683-937 P proteolysis
A=683-937 P virus-host interaction
Sequences
Download file with secondary structure created by Stride  
2fvq.pdb1.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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A (protein): 
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D (protein): 
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