General information
PDB ID 2HOI
Title CRYSTAL STRUCTURE OF THE TETRAMERIC PRE-CLEAVAGE SYNAPTIC COMPLEX IN THE CRE-LOXP SITE-SPECIFIC RECOMBINATION
PDB header RECOMBINATION/DNA
Date 2006-07-14
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.6
Kind dna
Organism ENTEROBACTERIA PHAGE P1
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2hoi.pdb ABGH CDEF 0
Biounits:
2hoi.pdb1.pdb ABGH CDEF 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Phage_int_SAM_4 Domain 0.00073 0 CL0469 A 26 102 CD
Phage_int_SAM_4 Domain 0.00073 0 CL0469 B 26 102 CD
Phage_int_SAM_4 Domain 0.00073 0 CL0469 G 26 102 EF
Phage_int_SAM_4 Domain 0.00073 0 CL0469 H 26 102 EF
Phage_integrase Family P06956_138-330 1.9e-34 1 CL0382 A 138 330 CD  H-Bb H-Mj S-Bb L-Bb L-Mj L-Mn 
Phage_integrase Family P06956_138-330 1.9e-34 1 CL0382 B 138 330 CD  H-Bb H-Mj S-Bb S-Mn L-Bb L-Mj L-Mn 
Phage_integrase Family P06956_138-330 1.9e-34 1 CL0382 G 138 330 EF  H-Bb H-Mj S-Bb L-Bb L-Mj L-Mn 
Phage_integrase Family P06956_138-330 1.9e-34 1 CL0382 H 138 330 EF  H-Bb H-Mj S-Bb L-Bb L-Mj L-Mn 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: SAM domain-like
    Superfamily: lambda integrase-like, N-terminal domain
      Family: lambda integrase-like, N-terminal domain
Cre recombinase A 20 129 CDF  H-Bb H-Mj L-Bb 
Class: All alpha proteins
  Fold: SAM domain-like
    Superfamily: lambda integrase-like, N-terminal domain
      Family: lambda integrase-like, N-terminal domain
Cre recombinase B 20 129 CD  H-Bb H-Mj L-Bb 
Class: All alpha proteins
  Fold: SAM domain-like
    Superfamily: lambda integrase-like, N-terminal domain
      Family: lambda integrase-like, N-terminal domain
Cre recombinase G 20 129 DEF  H-Bb H-Mj L-Bb 
Class: All alpha proteins
  Fold: SAM domain-like
    Superfamily: lambda integrase-like, N-terminal domain
      Family: lambda integrase-like, N-terminal domain
Cre recombinase H 20 129 EF  H-Bb H-Mj L-Bb 
Class: Alpha and beta proteins (a+b)
  Fold: DNA breaking-rejoining enzymes
    Superfamily: DNA breaking-rejoining enzymes
      Family: Lambda integrase-like, catalytic core
Cre recombinase A 130 341 CD  H-Bb H-Mj S-Bb L-Bb L-Mj L-Mn 
Class: Alpha and beta proteins (a+b)
  Fold: DNA breaking-rejoining enzymes
    Superfamily: DNA breaking-rejoining enzymes
      Family: Lambda integrase-like, catalytic core
Cre recombinase B 130 341 CD  H-Bb H-Mj S-Bb S-Mn L-Bb L-Mj L-Mn 
Class: Alpha and beta proteins (a+b)
  Fold: DNA breaking-rejoining enzymes
    Superfamily: DNA breaking-rejoining enzymes
      Family: Lambda integrase-like, catalytic core
Cre recombinase G 130 341 EF  H-Bb H-Mj S-Bb L-Bb L-Mj L-Mn 
Class: Alpha and beta proteins (a+b)
  Fold: DNA breaking-rejoining enzymes
    Superfamily: DNA breaking-rejoining enzymes
      Family: Lambda integrase-like, catalytic core
Cre recombinase H 130 341 EF  H-Bb H-Mj S-Bb L-Bb L-Mj L-Mn 
GO terms
Protein chains: GO type: GO description:
A/B/G/H=1-343 F DNA binding
A/B/G/H=1-343 P DNA recombination
A/B/G/H=1-343 P DNA integration
Sequences
Download file with secondary structure created by Stride  
2hoi.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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E (dna): 
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F (dna): 
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A (protein): 
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B (protein): 
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G (protein): 
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H (protein): 
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