General information
PDB ID 2LKX
Title NMR STRUCTURE OF THE HOMEODOMAIN OF PITX2 IN COMPLEX WITH A TAATCC DNA BINDING SITE
PDB header TRANSCRIPTION/DNA
Date 2011-10-21
Experimental method SOLUTION NMR
Resolution (A) N/A
Kind dna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2lkx.pdb A BC 17
Biounits:
2lkx.pdb1.pdb A BC 1
NMR models:
2lkx.MDL1.pdb A BC 1
2lkx.MDL2.pdb A BC 1
2lkx.MDL3.pdb A BC 1
2lkx.MDL4.pdb A BC 1
2lkx.MDL5.pdb A BC 1
2lkx.MDL6.pdb A BC 1
2lkx.MDL7.pdb A BC 1
2lkx.MDL8.pdb A BC 1
2lkx.MDL9.pdb A BC 1
2lkx.MDL10.pdb A BC 1
2lkx.MDL11.pdb A BC 1
2lkx.MDL12.pdb A BC 1
2lkx.MDL13.pdb A BC 1
2lkx.MDL14.pdb A BC 1
2lkx.MDL15.pdb A BC 1
2lkx.MDL16.pdb A BC 1
2lkx.MDL17.pdb A BC 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Homeodomain Domain Q99697_86-142 5.9e-24 1 CL0123 A 2 58 BC  H-Bb H-Mj L-Bb L-Mn 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A=85-144 C nuclear chromatin
A=85-144 C nucleoplasm
A=85-144 C nucleus
A=85-144 C transcription regulator complex
A=85-144 F DNA-binding transcription factor activity
A=85-144 F DNA-binding transcription factor activity, RNA polymerase II-specific
A=85-144 F DNA-binding transcription repressor activity, RNA polymerase II-specific
A=85-144 F identical protein binding
A=85-144 F phosphoprotein binding
A=85-144 F protein homodimerization activity
A=85-144 F ribonucleoprotein complex binding
A=85-144 F RNA polymerase II activating transcription factor binding
A=85-144 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
A=85-144 F RNA polymerase II transcription factor binding
A=85-144 F sequence-specific DNA binding
A=85-144 F sequence-specific double-stranded DNA binding
A=85-144 F transcription factor binding
A=85-144 F transcription regulatory region sequence-specific DNA binding
A=85-144 P anatomical structure morphogenesis
A=85-144 P camera-type eye development
A=85-144 P cardiac neural crest cell migration involved in outflow tract morphogenesis
A=85-144 P cell proliferation involved in outflow tract morphogenesis
A=85-144 P deltoid tuberosity development
A=85-144 P determination of left/right symmetry
A=85-144 P hair cell differentiation
A=85-144 P iris morphogenesis
A=85-144 P left/right axis specification
A=85-144 P negative regulation of transcription by RNA polymerase II
A=85-144 P odontogenesis
A=85-144 P positive regulation of transcription by RNA polymerase II
A=85-144 P prolactin secreting cell differentiation
A=85-144 P regulation of transcription by RNA polymerase II
A=85-144 P regulation of transcription, DNA-templated
A=85-144 P somatotropin secreting cell differentiation
A=85-144 P spleen development
Sequences
Download file with secondary structure created by Stride  
2lkx.MDL1.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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A (protein): 
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