General information
PDB ID 2NOQ
Title STRUCTURE OF RIBOSOME-BOUND CRICKET PARALYSIS VIRUS IRES RNA
PDB header RIBOSOME
Date 2006-10-26
Experimental method ELECTRON MICROSCOPY
Resolution (A) 7.3
Kind rna
Organism SACCHAROMYCES CEREVISIAE
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2noq.pdb FGH ABCDE 0
Biounits:
2noq.pdb1.pdb FGH ABCDE 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ribosomal_S7 Domain P26783_76-225 1.9e-37 1 No_clan F 76 224 A   
Ribosomal_L1 Domain P0CX43_16-212 8.4e-41 1 No_clan G 16 212 AE   
Ribosomal_L5_C Domain Q3E757_64-162 1.9e-22 1 No_clan H 63 161   
Ribosomal_L5 Domain Q3E757_7-60 1.8e-19 1 CL0652 H 6 59   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
F=76-225 C 90S preribosome
F=76-225 C cytosolic small ribosomal subunit
F=76-225 F structural constituent of ribosome
F=76-225 F RNA binding
F=76-225 P regulation of translational fidelity
F=76-225 P cytoplasmic translation
F=76-225 P rRNA export from nucleus
H=7-171 C cytosolic large ribosomal subunit
H=7-171 F rRNA binding
H=7-171 P ribosomal large subunit assembly
Sequences
Download file with secondary structure created by Stride  
2noq.pdb1.pdb:   [ download sequences in FASTA format ]
F (protein): 
Click "SHOW" for view sequence
G (protein): 
Click "SHOW" for view sequence
H (protein): 
Click "SHOW" for view sequence
A (rna): 
Click "SHOW" for view sequence
B (rna): 
Click "SHOW" for view sequence
C (rna): 
Click "SHOW" for view sequence
D (rna): 
Click "SHOW" for view sequence
E (rna): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2019

text