General information
PDB ID 2NUG
Title CRYSTAL STRUCTURE OF RNASE III FROM AQUIFEX AEOLICUS COMPLEXED WITH DS-RNA AT 1.7-ANGSTROM RESOLUTION
PDB header HYDROLASE/RNA
Date 2006-11-09
Experimental method X-RAY DIFFRACTION
Resolution (A) 1.7
Kind rna
Organism AQUIFEX AEOLICUS
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2nug.pdb AB CEDF 0
Biounits:
2nug.pdb1.pdb AB CEDF 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
dsrm Domain O67082_152-217 7.4e-17 1 CL0196 A 152 217 CDEF   
dsrm Domain O67082_152-217 7.5e-17 1 CL0196 B 152 217 CDEF   
Ribonucleas_3_3 Family 4.8e-21 1 CL0539 A 17 138 CDEF
Ribonucleas_3_3 Family 4.9e-21 1 CL0539 B 17 138 CDEF
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: RNase III domain-like
    Superfamily: RNase III domain-like
      Family: RNase III catalytic domain-like
RNase III endonuclease catalytic domain A 3 150 CDEF -
Class: Alpha and beta proteins (a+b)
  Fold: dsRBD-like
    Superfamily: dsRNA-binding domain-like
      Family: Double-stranded RNA-binding domain (dsRBD)
RNase III, C-terminal domain A 151 218 CDEF -
Class: All alpha proteins
  Fold: RNase III domain-like
    Superfamily: RNase III domain-like
      Family: RNase III catalytic domain-like
RNase III endonuclease catalytic domain B 3 150 CDEF -
Class: Alpha and beta proteins (a+b)
  Fold: dsRBD-like
    Superfamily: dsRNA-binding domain-like
      Family: Double-stranded RNA-binding domain (dsRBD)
RNase III, C-terminal domain B 151 220 CDEF -
GO terms
Protein chains: GO type: GO description:
A/B=1-221 C cytoplasm
A/B=1-221 F double-stranded RNA binding
A/B=1-221 F metal ion binding
A/B=1-221 F ribonuclease III activity
A/B=1-221 P nucleic acid phosphodiester bond hydrolysis
A/B=1-221 P mRNA processing
A/B=1-221 P rRNA processing
A/B=1-221 P rRNA catabolic process
A/B=1-221 P tRNA processing
Sequences
Download file with secondary structure created by Stride  
2nug.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
C (rna): 
Click "SHOW" for view sequence
D (rna): 
Click "SHOW" for view sequence
E (rna): 
Click "SHOW" for view sequence
F (rna): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2019

text