General information
PDB ID 2O4A
Title CRYSTAL STRUCTURE OF THE N-TERMINAL CUT DOMAIN OF SATB1 BOUND TO MATRIX ATTACHMENT REGION DNA
PDB header TRANSCRIPTION/DNA
Date 2006-12-04
Experimental method X-RAY DIFFRACTION
Resolution (A) 1.75
Kind dna
Organism HOMO SAPIENS
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CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
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Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2o4a.pdb A BC 0
Biounits:
2o4a.pdb1.pdb A BC 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
CUT Domain Q01826_370-445 4.6e-18 1 CL0123 A 370 445 BC  H-Bb H-Mj L-Bb L-Mj 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: lambda repressor-like DNA-binding domains
    Superfamily: lambda repressor-like DNA-binding domains
      Family: CUT domain
DNA-binding protein SATB1 A 370 452 BC -
GO terms
Protein chains: GO type: GO description:
A=368-452 C nuclear body
A=368-452 C nuclear chromatin
A=368-452 C nuclear heterochromatin
A=368-452 C nuclear matrix
A=368-452 C nucleoplasm
A=368-452 C nucleus
A=368-452 C PML body
A=368-452 F chromatin binding
A=368-452 F DNA-binding transcription factor activity, RNA polymerase II-specific
A=368-452 F DNA-binding transcription repressor activity, RNA polymerase II-specific
A=368-452 F double-stranded DNA binding
A=368-452 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
A=368-452 P activated T cell proliferation
A=368-452 P CD4-positive, alpha-beta T cell differentiation
A=368-452 P CD8-positive, alpha-beta T cell differentiation
A=368-452 P chromatin organization
A=368-452 P chromatin remodeling
A=368-452 P epidermis development
A=368-452 P histone methylation
A=368-452 P negative regulation of transcription by RNA polymerase II
A=368-452 P reflex
A=368-452 P regulation of transcription by RNA polymerase II
A=368-452 P viral process
Sequences
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2o4a.pdb1.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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A (protein): 
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