General information
PDB ID 2O4I
Title STRUCTURE OF TREX1 IN COMPLEX WITH DNA
PDB header HYDROLASE/DNA
Date 2006-12-04
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.5
Kind dna
Organism MUS MUSCULUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2o4i.pdb AB CD 0
Biounits:
2o4i.pdb1.pdb AB CD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
RNase_H_2 Domain 0.0008 0 CL0219 A 83 224 C
RNase_H_2 Domain 0.00073 0 CL0219 B 83 224 D
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a/b)
  Fold: Ribonuclease H-like motif
    Superfamily: Ribonuclease H-like
      Family: DnaQ-like 3'-5' exonuclease
Three prime repair exonuclease 1, TREX1 A 9 234 C -
Class: Alpha and beta proteins (a/b)
  Fold: Ribonuclease H-like motif
    Superfamily: Ribonuclease H-like
      Family: DnaQ-like 3'-5' exonuclease
Three prime repair exonuclease 1, TREX1 B 9 234 D -
GO terms
Protein chains: GO type: GO description:
A/B=9-245 C nucleus
A/B=9-245 F exodeoxyribonuclease III activity
A/B=9-245 F double-stranded DNA binding
A/B=9-245 F 3'-5' exonuclease activity
A/B=9-245 F adenyl deoxyribonucleotide binding
A/B=9-245 F single-stranded DNA binding
A/B=9-245 P cellular response to interferon-beta
A/B=9-245 P DNA repair
Sequences
Download file with secondary structure created by Stride  
2o4i.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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B (protein): 
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