General information
PDB ID 2OEH
Title DETERMINATION OF THE THREE-DIMENSIONAL STRUCTURE OF THE MRF2-DNA COMPLEX USING PARAMAGNETIC SPIN LABELING
PDB header TRANSCRIPTION/DNA
Date 2006-12-29
Experimental method SOLUTION NMR
Resolution (A) N/A
Kind dna
Organism HOMO SAPIENS
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2oeh.pdb A BC 17
NMR models:
2oeh.MDL1.pdb A BC 1
2oeh.MDL2.pdb A BC 1
2oeh.MDL3.pdb A BC 1
2oeh.MDL4.pdb A BC 1
2oeh.MDL5.pdb A BC 1
2oeh.MDL6.pdb A BC 1
2oeh.MDL7.pdb A BC 1
2oeh.MDL8.pdb A BC 1
2oeh.MDL9.pdb A BC 1
2oeh.MDL10.pdb A BC 1
2oeh.MDL11.pdb A BC 1
2oeh.MDL12.pdb A BC 1
2oeh.MDL13.pdb A BC 1
2oeh.MDL14.pdb A BC 1
2oeh.MDL15.pdb A BC 1
2oeh.MDL16.pdb A BC 1
2oeh.MDL17.pdb A BC 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
ARID Domain Q14865_320-406 2.2e-18 1 CL0123 A 3 89 BC  H-Bb H-Mj L-Bb L-Mj 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: ARID-like
      Family: ARID domain
MRF-2 DNA-binding domain A 1 107 BC -
GO terms
Protein chains: GO type: GO description:
A=318-424 C nucleoplasm
A=318-424 C nucleus
A=318-424 F DNA binding
A=318-424 F DNA-binding transcription repressor activity, RNA polymerase II-specific
A=318-424 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
A=318-424 F transcription coactivator activity
A=318-424 F transcription regulatory region sequence-specific DNA binding
A=318-424 P adipose tissue development
A=318-424 P adrenal gland development
A=318-424 P cell development
A=318-424 P cellular response to leukemia inhibitory factor
A=318-424 P face morphogenesis
A=318-424 P fat cell differentiation
A=318-424 P fat pad development
A=318-424 P female gonad development
A=318-424 P fibroblast migration
A=318-424 P kidney development
A=318-424 P liver development
A=318-424 P male gonad development
A=318-424 P multicellular organism growth
A=318-424 P muscle organ morphogenesis
A=318-424 P negative regulation of transcription by RNA polymerase II
A=318-424 P negative regulation of transcription, DNA-templated
A=318-424 P nitrogen compound metabolic process
A=318-424 P platelet-derived growth factor receptor signaling pathway
A=318-424 P positive regulation of DNA-binding transcription factor activity
A=318-424 P post-embryonic development
A=318-424 P regulation of transcription by RNA polymerase II
A=318-424 P roof of mouth development
A=318-424 P skeletal system morphogenesis
Sequences
Download file with secondary structure created by Stride  
2oeh.MDL1.pdb:   [ download sequences in FASTA format ]
B (dna): 
Click "SHOW" for view sequence
C (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2021

text