General information
PDB ID 2OZB
Title STRUCTURE OF A HUMAN PRP31-15.5K-U4 SNRNA COMPLEX
PDB header RNA BINDING PROTEIN/RNA
Date 2007-02-26
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.6
Kind rna
Organism HOMO SAPIENS
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2ozb.pdb ABDE CF 0
Biounits:
2ozb.pdb1.pdb AB C 1
2ozb.pdb2.pdb DE F 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ribosomal_L7Ae Domain P55769_20-114 2.3e-25 1 CL0101 A 20 114 C   
Ribosomal_L7Ae Domain P55769_20-114 2.2e-25 1 CL0101 D 20 114 F   
Nop Family Q8WWY3_99-330 1.6e-80 1 No_clan B 99 330 C   
Nop Family Q8WWY3_99-330 1.2e-81 1 No_clan E 99 330 F   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a+b)
  Fold: Bacillus chorismate mutase-like
    Superfamily: L30e-like
      Family: L30e/L7ae ribosomal proteins
Spliceosomal 15.5kd protein A 4 128 C -
Class: Alpha and beta proteins (a+b)
  Fold: Bacillus chorismate mutase-like
    Superfamily: L30e-like
      Family: L30e/L7ae ribosomal proteins
Spliceosomal 15.5kd protein D 4 128 F -
Class: All alpha proteins
  Fold: Nop domain
    Superfamily: Nop domain
      Family: Nop domain
U4/U6 small nuclear ribonucleoprotein Prp31 B 85 333 C -
Class: All alpha proteins
  Fold: Nop domain
    Superfamily: Nop domain
      Family: Nop domain
U4/U6 small nuclear ribonucleoprotein Prp31 E 85 333 F -
GO terms
Protein chains: GO type: GO description:
A/D=1-128 C box C/D snoRNP complex
A/D=1-128 C spliceosomal complex
A/D=1-128 C nucleoplasm
A/D=1-128 F RNA binding
A/D=1-128 P ribosome biogenesis
A/D=1-128 P nuclear mRNA splicing, via spliceosome
B/E=78-333 C MLL1 complex
B/E=78-333 C U4 snRNP
B/E=78-333 C Cajal body
B/E=78-333 C nuclear speck
B/E=78-333 C U2-type spliceosomal complex
B/E=78-333 C U4atac snRNP
B/E=78-333 C U4/U6 x U5 tri-snRNP complex
B/E=78-333 F snRNP binding
B/E=78-333 P assembly of spliceosomal tri-snRNP
Sequences
Download file with secondary structure created by Stride  
2ozb.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
C (rna): 
Click "SHOW" for view sequence
2ozb.pdb2.pdb:   [ download sequences in FASTA format ]
D (protein): 
Click "SHOW" for view sequence
E (protein): 
Click "SHOW" for view sequence
F (rna): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2019

text