General information
PDB ID 2Q2T
Title STRUCTURE OF CHLORELLA VIRUS DNA LIGASE-ADENYLATE BOUND TO A 5' PHOSPHORYLATED NICK
PDB header LIGASE/DNA
Date 2007-05-29
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.3
Kind dna
Organism PARAMECIUM BURSARIA CHLORELLA VIRUS 1
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2q2t.pdb A BCD 0
Biounits:
2q2t.pdb1.pdb A BCD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
DNA_ligase_OB_2 Domain O41026_225-293 5.4e-18 1 CL0021 A 225 293 BDC  H-Bb S-Bb S-Mn 
DNA_ligase_A_M Domain O41026_6-188 0.00000025 1 CL0078 A 6 188 BCD  S-Bb L-Bb 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All beta proteins
  Fold: OB-fold
    Superfamily: Nucleic acid-binding proteins
      Family: DNA ligase/mRNA capping enzyme postcatalytic domain
ATP-dependent DNA ligase A 190 293 BCD -
Class: Alpha and beta proteins (a+b)
  Fold: ATP-grasp
    Superfamily: DNA ligase/mRNA capping enzyme, catalytic domain
      Family: ATP-dependent DNA ligase catalytic domain
ATP-dependent DNA ligase, N-terminal domain A 2 189 BCD -
GO terms
No GO terms
Sequences
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2q2t.pdb1.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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D (dna): 
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A (protein): 
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