General information
PDB ID 2Q66
Title STRUCTURE OF YEAST POLY(A) POLYMERASE WITH ATP AND OLIGO(A)
PDB header TRANSFERASE/RNA
Date 2007-06-04
Experimental method X-RAY DIFFRACTION
Resolution (A) 1.8
Kind rna
Organism SACCHAROMYCES CEREVISIAE
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2q66.pdb A X 0
Biounits:
2q66.pdb1.pdb A X 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
PAP_central Domain P29468_8-351 2.2e-108 1 No_clan A 8 351 X   
PAP_RNA-bind Domain P29468_353-529 1.6e-46 1 No_clan A 353 529 X   
NTP_transf_2 Family P29468_69-161 0.000000000000036 1 CL0260 A 69 161 X   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: PAP/OAS1 substrate-binding domain
    Superfamily: PAP/OAS1 substrate-binding domain
      Family: Poly(A) polymerase, PAP, middle domain
Poly(A) polymerase, PAP, middle domain A 202 351 X -
Class: Alpha and beta proteins (a+b)
  Fold: Nucleotidyltransferase
    Superfamily: Nucleotidyltransferase
      Family: Poly(A) polymerase, PAP, N-terminal domain
Poly(A) polymerase, PAP, N-terminal domain A 5 201 X -
Class: Alpha and beta proteins (a+b)
  Fold: Ferredoxin-like
    Superfamily: PAP/Archaeal CCA-adding enzyme, C-terminal domain
      Family: Poly(A) polymerase, PAP, C-terminal domain
Poly(A) polymerase, PAP, C-terminal domain A 352 529 X -
GO terms
Protein chains: GO type: GO description:
A=5-529 C mRNA cleavage and polyadenylation specificity factor complex
A=5-529 F ATP binding
A=5-529 F RNA binding
A=5-529 F polynucleotide adenylyltransferase activity
A=5-529 F magnesium ion binding
A=5-529 P mRNA polyadenylation
A=5-529 P snoRNA polyadenylation
A=5-529 P transcription, DNA-dependent
Sequences
Download file with secondary structure created by Stride  
2q66.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
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X (rna): 
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