General information
PDB ID 2R1G
Title COORDINATES OF THE THERMUS THERMOPHILUS 30S COMPONENTS NEIGHBORING RBFA AS OBTAINED BY FITTING INTO THE CRYO-EM MAP OF A 30S-RBFA COMPLEX
PDB header RIBOSOMAL PROTEIN/RNA
Date 2007-08-22
Experimental method ELECTRON MICROSCOPY
Resolution (A) 12.5
Kind rna
Organism THERMUS THERMOPHILUS
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CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2r1g.pdb GHI ABCDEXF 0
Biounits:
2r1g.pdb1.pdb GHI ABCDEXF 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ribosomal_S9 Family P62669_8-128 4.9e-44 1 CL0329 G 8 128   
Ribosom_S12_S23 Family P61941_12-123 2.4e-43 1 CL0021 H 15 126   
Ribosomal_S13 Family P62655_3-109 8.9e-33 1 CL0303 I 3 109   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a+b)
  Fold: Ribosomal protein S5 domain 2-like
    Superfamily: Ribosomal protein S5 domain 2-like
      Family: Translational machinery components
Ribosomal protein S9 G 2 128 -
Class: Low resolution protein structures
  Fold: Ribosome and ribosomal fragments
    Superfamily: Ribosome and ribosomal fragments
      Family: Ribosome complexes
70S ribosome functional complex H 5 128 -
Class: All alpha proteins
  Fold: S13-like H2TH domain
    Superfamily: S13-like H2TH domain
      Family: Ribosomal protein S13
Ribosomal protein S13 I 2 126 -
GO terms
Protein chains: GO type: GO description:
H=2-125 C small ribosomal subunit
I=2-126 C ribosome
I=2-126 F structural constituent of ribosome
I=2-126 F tRNA binding
I=2-126 F rRNA binding
I=2-126 P translation
Sequences
Download file with secondary structure created by Stride  
2r1g.pdb1.pdb:   [ download sequences in FASTA format ]
G (protein): 
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H (protein): 
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I (protein): 
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A (rna): 
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B (rna): 
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C (rna): 
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D (rna): 
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E (rna): 
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F (rna): 
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X (rna): 
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