General information
PDB ID 2VJV
Title CRYSTAL STRUCTURE OF THE IS608 TRANSPOSASE IN COMPLEX WITH LEFT END 26-MER DNA HAIRPIN AND A 6-MER DNA REPRESENTING THE LEFT END CLEAVAGE SITE
PDB header DNA-BINDING PROTEIN
Date 2007-12-13
Experimental method X-RAY DIFFRACTION
Resolution (A) 1.9
Kind dna
Organism HELICOBACTER PYLORI
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2vjv.pdb AB CDEF 0
Biounits:
2vjv.pdb1.pdb AB CDEF 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Y1_Tnp Family Q933Z0_14-131 2.1e-39 1 CL0481 A 14 130 CDEF   
Y1_Tnp Family Q933Z0_14-131 2.1e-39 1 CL0481 B 14 130 CDEF   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a+b)
  Fold: Ferredoxin-like
    Superfamily: Transposase IS200-like
      Family: Transposase IS200-like
ISHP608 transposase A 6 130 CDEF -
Class: Alpha and beta proteins (a+b)
  Fold: Ferredoxin-like
    Superfamily: Transposase IS200-like
      Family: Transposase IS200-like
ISHP608 transposase B 6 130 CDEF -
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
2vjv.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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E (dna): 
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F (dna): 
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A (protein): 
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B (protein): 
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