General information
PDB ID 2ZO1
Title MOUSE NP95 SRA DOMAIN DNA SPECIFIC COMPLEX 2
PDB header LIGASE/DNA
Date 2008-05-05
Experimental method X-RAY DIFFRACTION
Resolution (A) 1.96
Kind dna
Organism MUS MUSCULUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb2zo1.pdb B DE 0
Biounits:
2zo1.pdb1.pdb B DE 1
2zo1.pdb2.pdb DE 1
2zo1.pdb3.pdb B 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
SAD_SRA Domain Q8VDF2_422-590 9.1e-59 1 CL0178 B 422 590  H-Bb S-Bb L-Bb L-Mj L-Mn 
SAD_SRA Domain Q8VDF2_422-590 9.1e-59 1 CL0178 B 422 590   
SAD_SRA Domain Q8VDF2_422-590 9.1e-59 1 CL0178 B 422 590 DE  H-Bb S-Bb L-Bb L-Mj L-Mn 
SAD_SRA Domain Q8VDF2_422-590 9.1e-59 1 CL0178 B 422 590 DE   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All beta proteins
  Fold: PUA domain-like
    Superfamily: PUA domain-like
      Family: SRA domain-like
E3 ubiquitin-protein ligase UHRF1 B 418 622 -
Class: All beta proteins
  Fold: PUA domain-like
    Superfamily: PUA domain-like
      Family: SRA domain-like
E3 ubiquitin-protein ligase UHRF1 B 418 622 -
Class: All beta proteins
  Fold: PUA domain-like
    Superfamily: PUA domain-like
      Family: SRA domain-like
E3 ubiquitin-protein ligase UHRF1 B 418 622 DE -
GO terms
Protein chains: GO type: GO description:
B=419-628 C cytoplasmic vesicle
B=419-628 C euchromatin
B=419-628 C heterochromatin
B=419-628 C nuclear chromatin
B=419-628 C nuclear heterochromatin
B=419-628 C nuclear matrix
B=419-628 C nucleoplasm
B=419-628 C nucleus
B=419-628 C plasma membrane
B=419-628 C replication fork
B=419-628 F cis-regulatory region sequence-specific DNA binding
B=419-628 F hemi-methylated DNA-binding
B=419-628 F histone binding
B=419-628 F identical protein binding
B=419-628 F methyl-CpG binding
B=419-628 F methylated histone binding
B=419-628 F nucleosomal histone binding
B=419-628 F ubiquitin protein ligase activity
B=419-628 F ubiquitin-protein transferase activity
B=419-628 F zinc ion binding
B=419-628 P cell cycle
B=419-628 P DNA repair
B=419-628 P histone monoubiquitination
B=419-628 P histone ubiquitination
B=419-628 P maintenance of DNA methylation
B=419-628 P negative regulation of transcription by RNA polymerase II
B=419-628 P positive regulation of cellular protein metabolic process
B=419-628 P protein autoubiquitination
B=419-628 P protein ubiquitination
B=419-628 P regulation of epithelial cell proliferation
B=419-628 P ubiquitin-dependent protein catabolic process
Sequences
Download file with secondary structure created by Stride  
2zo1.pdb1.pdb:   [ download sequences in FASTA format ]
D (dna): 
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E (dna): 
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B (protein): 
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2zo1.pdb2.pdb:   [ download sequences in FASTA format ]
D (dna): 
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E (dna): 
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2zo1.pdb3.pdb:   [ download sequences in FASTA format ]
B (protein): 
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