General information
PDB ID 3BQ2
Title POST-INSERTION BINARY COMPLEX OF DBH DNA POLYMERASE
PDB header TRANSFERASE/DNA
Date 2007-12-19
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.7
Kind dna
Organism SYNTHETIC CONSTRUCT, SULFOLOBUS ACIDOCALDARIUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3bq2.pdb A PT 0
Biounits:
3bq2.pdb1.pdb A PT 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
IMS Family Q4JB80_6-157 7.5e-44 1 No_clan A 6 157 P  S-Bb L-Mj 
IMS_HHH Motif Q4JB80_169-200 3.5e-09 1 CL0198 A 169 200 P  H-Bb L-Bb 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a+b)
  Fold: Lesion bypass DNA polymerase (Y-family), little finger domain
    Superfamily: Lesion bypass DNA polymerase (Y-family), little finger domain
      Family: Lesion bypass DNA polymerase (Y-family), little finger domain
DinB homolog (DBH) A 240 344 PT -
Class: Multi-domain proteins (alpha and beta)
  Fold: DNA/RNA polymerases
    Superfamily: DNA/RNA polymerases
      Family: Lesion bypass DNA polymerase (Y-family), catalytic domain
DinB homolog (DBH) A 1 239 P -
GO terms
Protein chains: GO type: GO description:
A=1-354 C cytoplasm
A=1-354 F damaged DNA binding
A=1-354 F DNA-directed DNA polymerase activity
A=1-354 F magnesium ion binding
A=1-354 P DNA repair
A=1-354 P DNA-dependent DNA replication
Sequences
Download file with secondary structure created by Stride  
3bq2.pdb1.pdb:   [ download sequences in FASTA format ]
P (dna): 
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T (dna): 
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A (protein): 
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