General information
PDB ID 3BRG
Title CSL (RBP-JK) BOUND TO DNA
PDB header DNA BINDING PROTEIN/DNA
Date 2007-12-21
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.2
Kind dna
Organism MUS MUSCULUS
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3brg.pdb C AB 0
Biounits:
3brg.pdb1.pdb C AB 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
BTD Domain P31266_232-354 2.9e-56 1 CL0066 C 232 354 B  L-Bb 
LAG1-DNAbind Domain P31266_74-204 3.2e-44 1 CL0073 C 74 204 AB  L-Bb L-Mj 
TIG_SUH Domain P31266_380-470 5.2e-32 1 CL0159 C 380 470   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
C=53-474 C cytoplasm
C=53-474 C MAML1-RBP-Jkappa- ICN1 complex
C=53-474 C nucleolus
C=53-474 C nucleoplasm
C=53-474 C nucleus
C=53-474 C protein-containing complex
C=53-474 C protein-DNA complex
C=53-474 C transcription regulator complex
C=53-474 C transcription repressor complex
C=53-474 F chromatin binding
C=53-474 F DNA binding
C=53-474 F DNA-binding transcription activator activity, RNA polymerase II-specific
C=53-474 F protein N-terminus binding
C=53-474 F protein-containing complex binding
C=53-474 F repressing transcription factor binding
C=53-474 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
C=53-474 F RNA polymerase II repressing transcription factor binding
C=53-474 F sequence-specific DNA binding
C=53-474 F transcription factor binding
C=53-474 P angiogenesis
C=53-474 P aortic valve development
C=53-474 P arterial endothelial cell fate commitment
C=53-474 P artery morphogenesis
C=53-474 P atrioventricular canal development
C=53-474 P auditory receptor cell fate commitment
C=53-474 P B cell differentiation
C=53-474 P blood vessel endothelial cell fate specification
C=53-474 P blood vessel lumenization
C=53-474 P blood vessel remodeling
C=53-474 P cardiac left ventricle morphogenesis
C=53-474 P cell fate commitment
C=53-474 P club cell differentiation
C=53-474 P defense response to bacterium
C=53-474 P determination of heart left/right asymmetry
C=53-474 P dorsal aorta morphogenesis
C=53-474 P endocardium development
C=53-474 P endocardium morphogenesis
C=53-474 P epidermal cell fate specification
C=53-474 P epithelial to mesenchymal transition
C=53-474 P epithelial to mesenchymal transition involved in endocardial cushion formation
C=53-474 P hair follicle maturation
C=53-474 P heart development
C=53-474 P heart looping
C=53-474 P hemopoiesis
C=53-474 P humoral immune response
C=53-474 P inflammatory response to antigenic stimulus
C=53-474 P interleukin-4 production
C=53-474 P keratinocyte differentiation
C=53-474 P labyrinthine layer blood vessel development
C=53-474 P myeloid dendritic cell differentiation
C=53-474 P negative regulation of cell differentiation
C=53-474 P negative regulation of cell population proliferation
C=53-474 P negative regulation of cold-induced thermogenesis
C=53-474 P negative regulation of neuron projection development
C=53-474 P negative regulation of ossification
C=53-474 P negative regulation of smooth muscle cell apoptotic process
C=53-474 P negative regulation of smooth muscle cell migration
C=53-474 P negative regulation of transcription by RNA polymerase II
C=53-474 P negative regulation of transcription, DNA-templated
C=53-474 P neuron differentiation
C=53-474 P Notch signaling pathway
C=53-474 P Notch signaling pathway involved in arterial endothelial cell fate commitment
C=53-474 P outflow tract morphogenesis
C=53-474 P pituitary gland development
C=53-474 P positive regulation of BMP signaling pathway
C=53-474 P positive regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment
C=53-474 P positive regulation of cardiac muscle cell proliferation
C=53-474 P positive regulation of cell population proliferation
C=53-474 P positive regulation of cell proliferation involved in heart morphogenesis
C=53-474 P positive regulation of ephrin receptor signaling pathway
C=53-474 P positive regulation of ERBB signaling pathway
C=53-474 P positive regulation of gene expression
C=53-474 P positive regulation of Notch signaling pathway involved in heart induction
C=53-474 P positive regulation of smooth muscle cell proliferation
C=53-474 P positive regulation of transcription by RNA polymerase II
C=53-474 P positive regulation of transcription from RNA polymerase II promoter in response to hypoxia
C=53-474 P positive regulation of transcription of Notch receptor target
C=53-474 P positive regulation of transcription, DNA-templated
C=53-474 P pulmonary valve development
C=53-474 P regulation of cell adhesion involved in heart morphogenesis
C=53-474 P regulation of cell population proliferation
C=53-474 P regulation of gene expression
C=53-474 P regulation of timing of cell differentiation
C=53-474 P regulation of transcription by RNA polymerase II
C=53-474 P regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation
C=53-474 P sebaceous gland development
C=53-474 P secondary heart field specification
C=53-474 P somatic stem cell population maintenance
C=53-474 P somitogenesis
C=53-474 P ventricular septum morphogenesis
C=53-474 P ventricular trabecula myocardium morphogenesis
Sequences
Download file with secondary structure created by Stride  
3brg.pdb1.pdb:   [ download sequences in FASTA format ]
A (dna): 
Click "SHOW" for view sequence
B (dna): 
Click "SHOW" for view sequence
C (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2021

text