General information
PDB ID 3E0D
Title INSIGHTS INTO THE REPLISOME FROM THE CRYSTRAL STRUCTURE OF THE TERNARY COMPLEX OF THE EUBACTERIAL DNA POLYMERASE III ALPHA-SUBUNIT
PDB header TRANSFERASE/DNA
Date 2008-07-31
Experimental method X-RAY DIFFRACTION
Resolution (A) 4.6
Kind dna
Organism THERMUS AQUATICUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3e0d.pdb AB CDEF 0
Biounits:
3e0d.pdb1.pdb A CD 1
3e0d.pdb2.pdb B EF 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
HHH_6 Domain Q9XDH5_865-953 1.3e-27 1 CL0198 A 865 953   
HHH_6 Domain Q9XDH5_865-953 1.3e-27 1 CL0198 B 865 953 E  H-Bb L-Bb 
DNA_pol3_alpha Family Q9XDH5_355-621 1.4e-167 1 CL0260 A 349 792 CD   
PHP Family Q9XDH5_9-184 2.9e-46 1 CL0034 A 9 184   
DNA_pol3_alpha Family Q9XDH5_355-621 1.4e-167 1 CL0260 B 349 792 EF  H-Bb S-Bb L-Bb L-Mn 
PHP Family Q9XDH5_9-184 2.9e-46 1 CL0034 B 9 184   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B=1-1220 C cytoplasm
A/B=1-1220 F DNA-directed DNA polymerase activity
A/B=1-1220 F DNA binding
A/B=1-1220 F 3'-5' exonuclease activity
A/B=1-1220 P DNA replication
Sequences
Download file with secondary structure created by Stride  
3e0d.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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3e0d.pdb2.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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B (protein): 
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