General information
PDB ID 3ECP
Title CRYSTAL STRUCTURE OF TN5 TRANSPOSASE COMPLEXED WITH 5' PHOSPHORYLATED TRANSPOSON END DNA
PDB header DNA RECOMBINATION/DNA
Date 2008-09-01
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.5
Kind dna
Organism ESCHERICHIA COLI
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3ecp.pdb A BC 0
Biounits:
3ecp.pdb1.pdb A BC 2
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
DDE_Tnp_1 Domain Q46731_124-362 1e-17 1 CL0219 A 124 362 BC  H-Bb H-Mn S-Bb S-Mj L-Bb L-Mj 
Tnp_DNA_bind Domain Q46731_11-69 7.5e-15 1 No_clan A 11 69 BC  H-Bb H-Mj H-Mn L-Bb 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a/b)
  Fold: Ribonuclease H-like motif
    Superfamily: Ribonuclease H-like
      Family: Transposase inhibitor (Tn5 transposase)
Transposase inhibitor (Tn5 transposase) A 5 477 BC  H-Bb H-Mj H-Mn S-Bb S-Mj L-Bb L-Mj 
GO terms
Protein chains: GO type: GO description:
A=1-476 F DNA binding
A=1-476 F endonuclease activity
A=1-476 F metal ion binding
A=1-476 F transposase activity
A=1-476 P transposition, DNA-mediated
Sequences
Download file with secondary structure created by Stride  
3ecp.pdb1.pdb:   [ download sequences in FASTA format ]
B (dna): 
Click "SHOW" for view sequence
C (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2021

text