General information
PDB ID 3EH8
Title CRYSTAL STRUCTURE OF Y2 I-ANII VARIANT (F13Y/S111Y)/DNA COMPLEX WITH CALCIUM
PDB header HYDROLASE/DNA
Date 2008-09-11
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.7
Kind dna
Organism EMERICELLA NIDULANS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3eh8.pdb ADG BCEFHI 0
Biounits:
3eh8.pdb1.pdb A BC 1
3eh8.pdb2.pdb D EF 1
3eh8.pdb3.pdb G HI 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
LAGLIDADG_1 Domain P03880_243-339 1.5e-22 1 CL0324 A 9 105 BC   
LAGLIDADG_1 Domain P03880_375-472 0.0000000000075 1 CL0324 A 141 238 BC   
LAGLIDADG_1 Domain P03880_243-339 1.5e-22 1 CL0324 D 9 105 EF   
LAGLIDADG_1 Domain P03880_375-472 0.0000000000075 1 CL0324 D 141 238 EF   
LAGLIDADG_1 Domain P03880_243-339 1.5e-22 1 CL0324 G 9 105 HI  H-Bb S-Bb S-Mj L-Mj 
LAGLIDADG_1 Domain P03880_375-472 0.0000000000075 1 CL0324 G 141 238 HI  H-Bb S-Bb S-Mj L-Bb L-Mj 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/D/G=237-488 C mitochondrion
A/D/G=237-488 F DNA binding
A/D/G=237-488 F endonuclease activity
A/D/G=237-488 P nucleic acid phosphodiester bond hydrolysis
A/D/G=237-488 P mRNA processing
A/D/G=237-488 P RNA splicing
A/D/G=237-488 P intron homing
Sequences
Download file with secondary structure created by Stride  
3eh8.pdb1.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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A (protein): 
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3eh8.pdb2.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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D (protein): 
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3eh8.pdb3.pdb:   [ download sequences in FASTA format ]
H (dna): 
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I (dna): 
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G (protein): 
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