General information
PDB ID 3FMT
Title CRYSTAL STRUCTURE OF SEQA BOUND TO DNA
PDB header REPLICATION INHIBITOR/DNA
Date 2008-12-22
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.98
Kind dna
Organism ESCHERICHIA COLI
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3fmt.pdb ABEF CDGH 0
Biounits:
3fmt.pdb1.pdb AB CD 1
3fmt.pdb2.pdb EF GH 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
SeqA Domain P0AFY8_71-180 2.2e-50 1 No_clan A 70 180 CD  H-Bb S-Bb L-Bb L-Mj 
SeqA_N Domain P0AFY8_1-35 3.7e-22 1 CL0057 A 1 36   
SeqA Domain P0AFY8_71-180 2e-50 1 No_clan B 70 180 CD  H-Bb H-Mj S-Bb L-Bb L-Mj L-Mn 
SeqA_N Domain P0AFY8_1-35 4.3e-22 1 CL0057 B 1 60   
SeqA Domain P0AFY8_71-180 2.2e-50 1 No_clan E 70 180 GH  H-Bb S-Bb L-Bb L-Mj 
SeqA_N Domain P0AFY8_1-35 3.7e-22 1 CL0057 E 1 36   
SeqA Domain P0AFY8_71-180 2e-50 1 No_clan F 70 180 GH  H-Bb H-Mj S-Bb L-Bb L-Mj L-Mn 
SeqA_N Domain P0AFY8_1-35 4.3e-22 1 CL0057 F 1 60   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B/E/F=1-181 C cytosol
A/B/E/F=1-181 C SeqA-DNA complex
A/B/E/F=1-181 F DNA replication origin binding
A/B/E/F=1-181 F double-stranded methylated DNA binding
A/B/E/F=1-181 F hemi-methylated DNA-binding
A/B/E/F=1-181 F identical protein binding
A/B/E/F=1-181 P negative regulation of DNA-dependent DNA replication initiation
A/B/E/F=1-181 P nucleoid organization
A/B/E/F=1-181 P protein homotetramerization
A/B/E/F=1-181 P regulation of transcription, DNA-templated
A/B/E/F=1-181 P response to radiation
A/B/E/F=1-181 P sister chromatid cohesion
Sequences
Download file with secondary structure created by Stride  
3fmt.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
Click "SHOW" for view sequence
D (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
3fmt.pdb2.pdb:   [ download sequences in FASTA format ]
G (dna): 
Click "SHOW" for view sequence
H (dna): 
Click "SHOW" for view sequence
E (protein): 
Click "SHOW" for view sequence
F (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2021

text