General information
PDB ID 3G6Q
Title GR DNA BINDING DOMAIN:FKBP5 BINDING SITE COMPLEX-9
PDB header TRANSCRIPTION/DNA
Date 2009-02-08
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.26
Kind dna
Organism RATTUS NORVEGICUS
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3g6q.pdb BA CD 0
Biounits:
3g6q.pdb1.pdb BAEF CDGH 0
3g6q.pdb2.pdb BA CD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
zf-C4 Domain P06536_438-507 6.7e-30 1 CL0167 A 438 507 CD  H-Bb H-Mj L-Bb 
zf-C4 Domain P06536_438-507 6.7e-30 1 CL0167 A 438 507 CD  H-Bb H-Mj L-Bb 
zf-C4 Domain P06536_438-507 6.7e-30 1 CL0167 A 438 507 CDH  H-Bb H-Mj L-Bb 
zf-C4 Domain P06536_438-507 6.7e-30 1 CL0167 A 438 507 CDH  H-Bb H-Mj L-Bb 
zf-C4 Domain P06536_438-507 5.5e-30 1 CL0167 B 438 507 CD  H-Bb H-Mj L-Bb 
zf-C4 Domain P06536_438-507 5.5e-30 1 CL0167 B 438 507 CD  H-Bb H-Mj L-Bb 
zf-C4 Domain P06536_438-507 5.5e-30 1 CL0167 B 438 507 CD  H-Bb H-Mj L-Bb 
zf-C4 Domain P06536_438-507 5.5e-30 1 CL0167 B 438 507 CD  H-Bb H-Mj L-Bb 
zf-C4 Domain 5.5e-30 1 CL0167 E 438 507 GH
zf-C4 Domain 6.7e-30 1 CL0167 F 438 507 DGH
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B=440-525 C protein complex
A/B=440-525 C cytoplasm
A/B=440-525 C synaptosome
A/B=440-525 C postsynaptic density
A/B=440-525 C membrane
A/B=440-525 C cytosol
A/B=440-525 C nucleus
A/B=440-525 F hormone binding
A/B=440-525 F sequence-specific DNA binding
A/B=440-525 F glucocorticoid receptor activity
A/B=440-525 F zinc ion binding
A/B=440-525 F chromatin binding
A/B=440-525 F transcription coactivator activity
A/B=440-525 F steroid binding
A/B=440-525 F RNA polymerase II regulatory region DNA binding
A/B=440-525 F sequence-specific DNA binding transcription factor activity
A/B=440-525 F double-stranded DNA binding
A/B=440-525 P mammary gland duct morphogenesis
A/B=440-525 P circadian rhythm
A/B=440-525 P positive regulation of glutamate secretion
A/B=440-525 P regulation of glucocorticoid biosynthetic process
A/B=440-525 P response to calcium ion
A/B=440-525 P response to inactivity
A/B=440-525 P regulation of glucose metabolic process
A/B=440-525 P transcription, DNA-dependent
A/B=440-525 P response to corticosterone stimulus
A/B=440-525 P lung development
A/B=440-525 P anti-apoptosis
A/B=440-525 P chromatin-mediated maintenance of transcription
A/B=440-525 P positive regulation of transcription from RNA polymerase II promoter
A/B=440-525 P response to arsenic-containing substance
A/B=440-525 P negative regulation of vascular permeability
A/B=440-525 P cellular response to dexamethasone stimulus
A/B=440-525 P response to mercury ion
A/B=440-525 P response to radiation
A/B=440-525 P adrenal gland development
A/B=440-525 P regulation of gluconeogenesis
A/B=440-525 P androgen metabolic process
A/B=440-525 P brain development
A/B=440-525 P aging
A/B=440-525 P response to electrical stimulus
A/B=440-525 P glucocorticoid metabolic process
A/B=440-525 P response to activity
A/B=440-525 P negative regulation of transforming growth factor beta receptor signaling pathway
A/B=440-525 P cellular response to magnesium ion
A/B=440-525 P muscle atrophy
A/B=440-525 P regulation of cell proliferation
A/B=440-525 P positive regulation of neuron apoptotic process
A/B=440-525 P positive regulation of glucocorticoid receptor signaling pathway
A/B=440-525 P response to insulin stimulus
Sequences
Download file with secondary structure created by Stride  
3g6q.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
Click "SHOW" for view sequence
D (dna): 
Click "SHOW" for view sequence
G (dna): 
Click "SHOW" for view sequence
H (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
E (protein): 
Click "SHOW" for view sequence
F (protein): 
Click "SHOW" for view sequence
3g6q.pdb2.pdb:   [ download sequences in FASTA format ]
C (dna): 
Click "SHOW" for view sequence
D (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2020

text