General information
PDB ID 3G8U
Title DNA BINDING DOMAIN:GILZ 16BP COMPLEX-5
PDB header TRANSCRIPTION/DNA
Date 2009-02-12
Experimental method X-RAY DIFFRACTION
Resolution (A) 1.9
Kind dna
Organism RATTUS NORVEGICUS
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3g8u.pdb AB DC 0
Biounits:
3g8u.pdb1.pdb AB DC 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
zf-C4 Domain P06536_438-507 7e-30 1 CL0167 A 438 507 CD  H-Bb H-Mj L-Bb 
zf-C4 Domain P06536_438-507 8.1e-30 1 CL0167 B 439 507 CD  H-Bb H-Mj S-Bb L-Bb 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B=440-525 C synaptosome
A/B=440-525 C cytosol
A/B=440-525 C postsynaptic density
A/B=440-525 C cytoplasm
A/B=440-525 C membrane
A/B=440-525 C nucleus
A/B=440-525 C protein complex
A/B=440-525 F zinc ion binding
A/B=440-525 F transcription coactivator activity
A/B=440-525 F glucocorticoid receptor activity
A/B=440-525 F sequence-specific DNA binding
A/B=440-525 F hormone binding
A/B=440-525 F RNA polymerase II regulatory region DNA binding
A/B=440-525 F sequence-specific DNA binding transcription factor activity
A/B=440-525 F chromatin binding
A/B=440-525 F steroid binding
A/B=440-525 F double-stranded DNA binding
A/B=440-525 P response to inactivity
A/B=440-525 P lung development
A/B=440-525 P positive regulation of glucocorticoid receptor signaling pathway
A/B=440-525 P positive regulation of neuron apoptotic process
A/B=440-525 P glucocorticoid metabolic process
A/B=440-525 P aging
A/B=440-525 P negative regulation of vascular permeability
A/B=440-525 P androgen metabolic process
A/B=440-525 P positive regulation of glutamate secretion
A/B=440-525 P cellular response to dexamethasone stimulus
A/B=440-525 P circadian rhythm
A/B=440-525 P response to insulin stimulus
A/B=440-525 P transcription, DNA-dependent
A/B=440-525 P positive regulation of transcription from RNA polymerase II promoter
A/B=440-525 P adrenal gland development
A/B=440-525 P chromatin-mediated maintenance of transcription
A/B=440-525 P response to corticosterone stimulus
A/B=440-525 P mammary gland duct morphogenesis
A/B=440-525 P regulation of glucocorticoid biosynthetic process
A/B=440-525 P cellular response to magnesium ion
A/B=440-525 P negative regulation of transforming growth factor beta receptor signaling pathway
A/B=440-525 P response to electrical stimulus
A/B=440-525 P brain development
A/B=440-525 P regulation of cell proliferation
A/B=440-525 P muscle atrophy
A/B=440-525 P response to activity
A/B=440-525 P regulation of glucose metabolic process
A/B=440-525 P response to radiation
A/B=440-525 P response to mercury ion
A/B=440-525 P anti-apoptosis
A/B=440-525 P response to arsenic-containing substance
A/B=440-525 P response to calcium ion
A/B=440-525 P regulation of gluconeogenesis
Sequences
Download file with secondary structure created by Stride  
3g8u.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
Click "SHOW" for view sequence
D (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2020

text