General information
PDB ID 3G9M
Title GR DNA-BINDING DOMAIN:SGK 16BP COMPLEX-44
PDB header TRANSCRIPTION/DNA
Date 2009-02-13
Experimental method X-RAY DIFFRACTION
Resolution (A) 1.61
Kind dna
Organism RATTUS NORVEGICUS
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3g9m.pdb AB DC 0
Biounits:
3g9m.pdb1.pdb AB DC 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
zf-C4 Domain P06536_438-507 6.7e-30 1 CL0167 A 438 507 CD  H-Bb H-Mj L-Bb 
zf-C4 Domain P06536_438-507 6.7e-30 1 CL0167 B 438 507 CD  H-Bb H-Mj S-Mj L-Bb 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B=440-525 C protein complex
A/B=440-525 C synaptosome
A/B=440-525 C postsynaptic density
A/B=440-525 C cytoplasm
A/B=440-525 C nucleus
A/B=440-525 C membrane
A/B=440-525 C cytosol
A/B=440-525 F steroid binding
A/B=440-525 F chromatin binding
A/B=440-525 F double-stranded DNA binding
A/B=440-525 F sequence-specific DNA binding
A/B=440-525 F RNA polymerase II regulatory region DNA binding
A/B=440-525 F hormone binding
A/B=440-525 F sequence-specific DNA binding transcription factor activity
A/B=440-525 F transcription coactivator activity
A/B=440-525 F zinc ion binding
A/B=440-525 F glucocorticoid receptor activity
A/B=440-525 P response to corticosterone stimulus
A/B=440-525 P response to calcium ion
A/B=440-525 P circadian rhythm
A/B=440-525 P response to radiation
A/B=440-525 P response to insulin stimulus
A/B=440-525 P positive regulation of transcription from RNA polymerase II promoter
A/B=440-525 P brain development
A/B=440-525 P positive regulation of neuron apoptotic process
A/B=440-525 P cellular response to magnesium ion
A/B=440-525 P adrenal gland development
A/B=440-525 P transcription, DNA-dependent
A/B=440-525 P response to inactivity
A/B=440-525 P response to activity
A/B=440-525 P androgen metabolic process
A/B=440-525 P positive regulation of glutamate secretion
A/B=440-525 P mammary gland duct morphogenesis
A/B=440-525 P aging
A/B=440-525 P positive regulation of glucocorticoid receptor signaling pathway
A/B=440-525 P negative regulation of vascular permeability
A/B=440-525 P chromatin-mediated maintenance of transcription
A/B=440-525 P cellular response to dexamethasone stimulus
A/B=440-525 P response to electrical stimulus
A/B=440-525 P regulation of glucose metabolic process
A/B=440-525 P anti-apoptosis
A/B=440-525 P response to arsenic-containing substance
A/B=440-525 P negative regulation of transforming growth factor beta receptor signaling pathway
A/B=440-525 P regulation of cell proliferation
A/B=440-525 P lung development
A/B=440-525 P regulation of gluconeogenesis
A/B=440-525 P glucocorticoid metabolic process
A/B=440-525 P response to mercury ion
A/B=440-525 P regulation of glucocorticoid biosynthetic process
A/B=440-525 P muscle atrophy
Sequences
Download file with secondary structure created by Stride  
3g9m.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
Click "SHOW" for view sequence
D (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2020

text