General information
PDB ID 3GLI
Title CRYSTAL STRUCTURE OF THE E. COLI CLAMP LOADER BOUND TO PRIMER-TEMPLATE DNA AND PSI PEPTIDE
PDB header TRANSFERASE/DNA
Date 2009-03-12
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.5
Kind dna
Organism ESCHERICHIA COLI
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3gli.pdb ABCDEFGHIJOP KLMN 0
Biounits:
3gli.pdb1.pdb ABCDEO KL 1
3gli.pdb2.pdb FGHIJP MN 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
DNA_pol3_delta2 Domain P06710_20-179 1.2e-42 1 CL0023 B 20 179 KL   
DNA_pol3_delta2 Domain P06710_20-179 1.2e-42 1 CL0023 C 20 179 K   
DNA_pol3_delta2 Domain P06710_20-179 1.2e-42 1 CL0023 D 20 179 K   
DNA_pol3_delta2 Domain P28631_8-167 1.2e-40 1 CL0023 E 8 167 K   
DNApol3-delta_C Domain P28631_207-321 3.5e-37 1 CL0604 E 207 321   
DNA_pol3_delta2 Domain P06710_20-179 1.3e-42 1 CL0023 G 20 179 MN  H-Bb L-Bb 
DNA_pol3_delta2 Domain P06710_20-179 1.2e-42 1 CL0023 H 20 179 M  H-Bb L-Bb 
DNA_pol3_delta2 Domain P06710_20-179 1.2e-42 1 CL0023 I 20 179 M  H-Bb L-Bb 
DNA_pol3_delta2 Domain P28631_8-167 1.2e-40 1 CL0023 J 8 167 M  H-Bb L-Bb 
DNApol3-delta_C Domain P28631_207-321 3.5e-37 1 CL0604 J 207 321   
DNA_pol3_delt_C Family P28630_214-333 7.5e-71 1 CL0604 A 214 333 KL   
DNA_pol3_delta Family P28630_21-190 7.5e-48 1 CL0023 A 21 190   
DNA_pol3_gamma3 Family P06710_232-363 3.9e-32 1 CL0604 B 232 363   
DNA_pol3_gamma3 Family P06710_232-368 1.1e-32 1 CL0604 C 232 367   
DNA_pol3_gamma3 Family P06710_232-363 4e-32 1 CL0604 D 232 363   
DNA_pol3_delt_C Family P28630_214-333 1.3e-71 1 CL0604 F 214 334 MN  L-Bb L-Mj L-Mn 
DNA_pol3_delta Family P28630_21-190 7.5e-48 1 CL0023 F 21 190   
DNA_pol3_gamma3 Family P06710_232-363 4.2e-32 1 CL0604 G 232 363   
DNA_pol3_gamma3 Family P06710_232-368 1.1e-32 1 CL0604 H 232 367   
DNA_pol3_gamma3 Family P06710_232-363 4e-32 1 CL0604 I 232 363   
DNA_III_psi Family P28632_2-28 2.8e-09 1 No_clan O 2 28   
DNA_III_psi Family P28632_2-28 2.8e-09 1 No_clan P 2 28   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/F=1-343 C DNA polymerase III complex
A/F=1-343 P DNA-dependent DNA replication
B/C/D/G/H/I=1-373 C DNA polymerase III, DnaX complex
B/C/D/G/H/I=1-373 F DNA-directed DNA polymerase activity
B/C/D/G/H/I=1-373 F DNA binding
B/C/D/G/H/I=1-373 F DNA polymerase processivity factor activity
B/C/D/G/H/I=1-373 F ATP binding
B/C/D/G/H/I=1-373 F ATPase activity
B/C/D/G/H/I=1-373 P DNA replication
O/P=2-28 F 3'-5' exonuclease activity
Sequences
Download file with secondary structure created by Stride  
3gli.pdb1.pdb:   [ download sequences in FASTA format ]
K (dna): 
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L (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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E (protein): 
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O (protein): 
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3gli.pdb2.pdb:   [ download sequences in FASTA format ]
M (dna): 
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N (dna): 
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F (protein): 
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G (protein): 
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H (protein): 
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I (protein): 
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J (protein): 
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P (protein): 
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