General information
PDB ID 3IY9
Title LEISHMANIA TARENTOLAE MITOCHONDRIAL LARGE RIBOSOMAL SUBUNIT MODEL
PDB header RIBOSOME
Date 2009-04-20
Experimental method ELECTRON MICROSCOPY
Resolution (A) 14.1
Kind rna
Organism LEISHMANIA TARENTOLAE, HOMO SAPIENS, ESCHERICHIA COLI
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3iy9.pdb BCDHGJKLISQRMTNOXYP A 0
Biounits:
3iy9.pdb1.pdb BCDHGJKLISQRMTNOXYP A 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ribosomal_L2_C Domain Q2TA12_178-262 5.9e-24 1 CL0107 B 241 325   
Ribosomal_L2 Domain Q2TA12_127-166 7.1e-13 1 CL0021 B 190 229   
Ribosomal_L11_N Domain Q2YDI0_13-78 4.7e-23 1 No_clan G 8 66   
Ribosomal_L11 Domain Q2YDI0_83-155 1.8e-22 1 No_clan G 72 143   
Ribosomal_L9_N Domain 3e-23 1 No_clan H 1 47
Ribosomal_L14 Domain P0ADY3_2-122 2.1e-53 1 No_clan K 995 1115   
Ribosomal_L22 Domain Q3SZX5_67-171 1.8e-27 1 No_clan M 1598 1702   
Ribosomal_L30 Domain 2.7e-19 1 No_clan Y 4 54
Ribosomal_L3 Family 1e-14 1 CL0575 C 329 510
Ribosomal_L4 Family 1.5e-48 1 No_clan D 680 854
Ribosomal_L16 Family 2.1e-29 1 No_clan I 1 118
Ribosomal_L13 Family P0AA10_14-138 4.7e-57 1 No_clan J 868 992   
Ribosomal_L27A Family 3.4e-32 1 CL0588 L 1142 1259
ribosomal_L24 Family Q3SYS0_91-154 3.6e-13 1 No_clan N 1839 1902   
KOW Family Q3SYS0_59-89 1.9e-08 1 CL0107 N 1807 1836   
Ribosomal_L27 Family 3e-25 1 No_clan O 1 69
Ribosomal_L33 Family 2.3e-07 1 CL0167 P 3 52
Ribosomal_L20 Family 5.1e-49 1 No_clan Q 1379 1485
Ribosomal_L21p Family 1.3e-37 1 No_clan R 1495 1595
Ribosomal_L17 Family Q3T0L3_28-126 1.4e-25 1 No_clan S 18 115   
Ribosomal_L23 Family P0ADZ0_9-95 4.3e-31 1 No_clan T 1716 1802   
Ribosomal_L29 Family 6.4e-23 1 CL0346 X 4 60
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
3iy9.pdb1.pdb:   [ download sequences in FASTA format ]
B (protein): 
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C (protein): 
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D (protein): 
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G (protein): 
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H (protein): 
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I (protein): 
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J (protein): 
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K (protein): 
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L (protein): 
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M (protein): 
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N (protein): 
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O (protein): 
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P (protein): 
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Q (protein): 
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R (protein): 
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S (protein): 
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T (protein): 
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X (protein): 
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Y (protein): 
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A (rna): 
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