General information
PDB ID 3J0D
Title MODELS FOR THE T. THERMOPHILUS RIBOSOME RECYCLING FACTOR BOUND TO THE E. COLI POST-TERMINATION COMPLEX
PDB header TRANSLATION
Date 2011-06-29
Experimental method ELECTRON MICROSCOPY
Resolution (A) 11.1
Kind rna
Organism ESCHERICHIA COLI, THERMUS THERMOPHILUS
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3j0d.pdb GIJ ABCDEFHh 0
Biounits:
3j0d.pdb1.pdb GIJ ABCDEFHh 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ribosomal_L11_N Domain P0A7J7_2-67 1.2e-29 1 No_clan G 8 66 A   
Ribosomal_L11 Domain P0A7J7_72-140 4.4e-24 1 No_clan G 71 139 A   
RRF Domain Q9WX76_21-184 1.2e-64 1 No_clan J 21 184 AF   
Ribosom_S12_S23 Family P0A7S3_12-123 4.8e-43 1 CL0021 I 10 121 H   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
G=2-142 C cytosolic large ribosomal subunit
G=2-142 P translational termination
G=2-142 P stringent response
I=2-124 C cytosolic small ribosomal subunit
I=2-124 F structural constituent of ribosome
I=2-124 F misfolded RNA binding
I=2-124 F rRNA binding
I=2-124 F tRNA binding
I=2-124 P RNA folding
I=2-124 P Group I intron splicing
I=2-124 P response to antibiotic
I=2-124 P positive regulation of RNA splicing
I=2-124 P translation
J=1-185 C cytoplasm
Sequences
Download file with secondary structure created by Stride  
3j0d.pdb1.pdb:   [ download sequences in FASTA format ]
G (protein): 
Click "SHOW" for view sequence
I (protein): 
Click "SHOW" for view sequence
J (protein): 
Click "SHOW" for view sequence
A (rna): 
Click "SHOW" for view sequence
B (rna): 
Click "SHOW" for view sequence
C (rna): 
Click "SHOW" for view sequence
D (rna): 
Click "SHOW" for view sequence
E (rna): 
Click "SHOW" for view sequence
F (rna): 
Click "SHOW" for view sequence
H (rna): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2020

text