General information
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| PDB ID | 3J0E |
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| Title | MODELS FOR THE T. THERMOPHILUS RIBOSOME RECYCLING FACTOR AND THE E. COLI ELONGATION FACTOR G BOUND TO THE E. COLI POST-TERMINATION COMPLEX | ||||
| PDB header | TRANSLATION | ||||
| Date | 2011-06-29 | ||||
| Experimental method | ELECTRON MICROSCOPY | ||||
| Resolution (A) | 9.9 | ||||
| Kind | rna | ||||
| Organism | ESCHERICHIA COLI, THERMUS THERMOPHILUS | ||||
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Quick Links
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Composition of PDB entry and biounits
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| File: | Protein chains: | DNA chains: | RNA chains: | No. of models: | Action: |
| PDB entry: | |||||
| pdb3j0e.pdb | FGH | ABCDEe | 0 |
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| Biounits: | |||||
| 3j0e.pdb1.pdb | FGH | ABCDEe | 1 |
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Pfam domains
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| Name: | Type: | Domain: | E-value: | Significance: | Clan: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
RRF
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Domain | Q9WX76_21-184 | 1.2e-64 | 1 | No_clan | G | 21 | 184 | ABC |
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GTP_EFTU
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Domain | P0A6M8_8-288 | 1.1e-67 | 1 |
CL0023
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H | 8 | 288 |
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EFG_IV
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Domain | P0A6M8_486-609 | 1.8e-45 | 1 |
CL0329
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H | 486 | 609 |
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EFG_II
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Domain | P0A6M8_411-485 | 1.1e-33 | 1 |
CL0437
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H | 411 | 485 |
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EFG_C
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Domain | P0A6M8_611-698 | 8.3e-29 | 1 |
CL0437
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H | 611 | 698 |
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GTP_EFTU_D2
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Domain | P0A6M8_331-398 | 5.2e-16 | 1 |
CL0575
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H | 331 | 398 |
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Ribosom_S12_S23
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Family | P0A7S3_12-123 | 4.9e-43 | 1 |
CL0021
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F | 11 | 122 |
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SCOP domains
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| No SCOP domains | |||||||
| GO terms | ||
| Protein chains: | GO type: | GO description: |
| F=2-124 | C | cytosolic small ribosomal subunit |
| F=2-124 | F | misfolded RNA binding |
| F=2-124 | F | tRNA binding |
| F=2-124 | F | rRNA binding |
| F=2-124 | F | structural constituent of ribosome |
| F=2-124 | P | response to antibiotic |
| F=2-124 | P | Group I intron splicing |
| F=2-124 | P | positive regulation of RNA splicing |
| F=2-124 | P | translation |
| F=2-124 | P | RNA folding |
| H=2-703 | C | cytoplasm |
| H=2-703 | F | GTPase activity |
| H=2-703 | F | translation elongation factor activity |
| H=2-703 | F | GTP binding |
| H=2-703 | P | GTP catabolic process |
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Sequences
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Download file with secondary structure created by Stride
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3j0e.pdb1.pdb:
[
download sequences in FASTA format
]
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F (protein):
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G (protein):
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H (protein):
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A (rna):
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B (rna):
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C (rna):
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D (rna):
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e (rna):
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