General information
PDB ID 3J3W
Title ATOMIC MODEL OF THE IMMATURE 50S SUBUNIT FROM BACILLUS SUBTILIS (STATE II-A)
PDB header RIBOSOME
Date 2013-04-28
Experimental method ELECTRON MICROSCOPY
Resolution (A) 10.7
Kind rna
Organism BACILLUS SUBTILIS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3j3w.pdb 0CNGJKLPQDRSTUX256E A 0
Biounits:
3j3w.pdb1.pdb 0CNGJKLPQDRSTUX256E A 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ribosomal_L1 Domain Q06797_30-220 2.6e-11 1 No_clan 5 57 220 A   
Ribosomal_L11_N Domain Q06796_2-66 1.9e-31 1 No_clan 6 9 66 A   
Ribosomal_L11 Domain Q06796_71-139 2.3e-26 1 No_clan 6 71 139 A   
Ribosomal_L2_C Domain P42919_125-251 2.8e-57 1 CL0107 C 125 251 A   
Ribosomal_L2 Domain P42919_42-118 4.5e-33 1 CL0021 C 42 118 A   
Ribosomal_L6 Domain P46898_11-83 2e-24 1 No_clan G 11 83 A   
Ribosomal_L6 Domain P46898_91-166 6.5e-21 1 No_clan G 91 166 A   
Ribosomal_L14 Domain P12875_1-122 3.9e-54 1 No_clan K 1 122 A   
Ribosomal_L22 Domain P42060_5-108 2.7e-37 1 No_clan S 5 108 A   
Ribosomal_L32p Family O34687_2-56 3.2e-25 1 CL0167 0 2 55 A   
Ribosomal_L34 Family P05647_1-44 5.7e-23 1 No_clan 2 1 44 A   
Ribosomal_L3 Family P42920_85-184 7.4e-17 1 CL0575 D 57 185 A   
Ribosomal_L4 Family P42921_17-205 1.5e-73 1 No_clan E 17 205 A   
Ribosomal_L13 Family P70974_15-139 6.9e-58 1 No_clan J 15 139 A   
Ribosomal_L27A Family P19946_27-145 5.6e-39 1 CL0588 L 27 145 A   
Ribosomal_L17 Family P20277_16-120 5.1e-40 1 No_clan N 16 120 A   
Ribosomal_L19 Family O31742_3-113 5.1e-54 1 CL0107 P 3 113 A   
Ribosomal_L20 Family P55873_3-109 4.1e-50 1 No_clan Q 3 109 A   
Ribosomal_L21p Family P26908_1-100 1.4e-40 1 No_clan R 1 100 A   
Ribosomal_L23 Family P42924_6-92 3.4e-32 1 No_clan T 6 92 A   
ribosomal_L24 Family P0CI78_38-101 7.3e-31 1 No_clan U 38 101 A   
KOW Family P0CI78_5-36 7.3e-10 1 CL0107 U 5 36 A   
Ribosomal_L29 Family P12873_4-60 9.7e-27 1 CL0346 X 4 60 A   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
3j3w.pdb1.pdb:   [ download sequences in FASTA format ]
0 (protein): 
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2 (protein): 
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5 (protein): 
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6 (protein): 
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C (protein): 
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D (protein): 
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E (protein): 
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G (protein): 
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J (protein): 
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K (protein): 
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L (protein): 
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N (protein): 
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P (protein): 
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Q (protein): 
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R (protein): 
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S (protein): 
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T (protein): 
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U (protein): 
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X (protein): 
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A (rna): 
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