General information
PDB ID 3J7Y
Title STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM HUMAN MITOCHONDRIA
PDB header RIBOSOME
Date 2014-08-26
Experimental method ELECTRON MICROSCOPY
Resolution (A) 3.4
Kind rna
Organism HOMO SAPIENS
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CATH PDBsum HSSP PDBePISA UniProt
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Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3j7y.pdb DEFHIJKLMNOPQRSTUVWXYZ0123456789abcdefghijkopqrst AB 0
Biounits:
3j7y.pdb1.pdb DEFHIJKLMNOPQRSTUVWXYZ0123456789abcdefghijkopqrst AB 1
Pfam domains
Name: Type: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Action:
Ribosomal_L36 Domain 7.4e-17 1 No_clan 4 67 102 A
PBP Domain 0.0000000045 1 No_clan 6 175 314
L51_S25_CI-B8 Domain 0.00000000003 1 CL0172 b 43 95 A
Ribosomal_L2 Domain 4.1e-29 1 CL0021 D 84 165 A
Ribosomal_L2_C Domain 5.4e-29 1 CL0107 D 177 293 A
Tim44 Domain 6.9e-25 1 CL0051 d 118 266 A
Img2 Domain 1.6e-28 1 No_clan g 82 166 A
Ribosomal_L9_N Domain 3.4e-17 1 No_clan H 94 140 A
Ribosomal_L50 Domain 0.0000000000073 1 CL0314 h 60 155 A
Ribosomal_L11_N Domain 4.4e-23 1 No_clan J 20 78 A
Ribosomal_L11 Domain 1.6e-22 1 No_clan J 84 155 A
Ribosomal_L14 Domain 1.1e-17 1 No_clan L 31 145 A
Ribosomal_L22 Domain 7.2e-27 1 No_clan T 75 179 A
Ribosomal_L30 Domain 0.000000000001 1 No_clan Z 67 117 A
Ribosomal_L32p Family 0.0000000046 1 CL0167 0 79 136 A
RecR Family 0.00023 0 No_clan 0 98 129 A
Ribosomal_L33 Family 0.00000026 1 CL0167 1 16 60 A
Ribosomal_L34 Family 2e-19 1 No_clan 2 50 92 A
Ribosomal_L35p Family 3.8e-16 1 No_clan 3 102 162 A
PDCD9 Family 0.00000018 1 CL0236 5 196 420 A
MRP-L28 Family 4.6e-18 1 No_clan 8 63 119 B
MRP-L27 Family 5.1e-36 1 No_clan 9 15 135 A
MRP-S32 Family 0.0000000000000034 1 No_clan a 104 142 A
Ribosomal_L3 Family 9e-70 1 CL0575 E 114 340 AB
Ribosomal_L4 Family 6.7e-55 1 No_clan F 80 272 AB
MRP-L51 Family 2.1e-36 1 No_clan i 38 126 A
Ribosomal_L10 Family 0.000000089 1 No_clan I 81 171 A
Ribosomal_L13 Family 1.9e-45 1 No_clan K 17 141 A
MRP_L53 Family 4e-16 1 No_clan k 20 71 A
Ribosomal_L27A Family 2e-28 1 CL0588 M 45 176 A
Ribosomal_L16 Family 3.2e-30 1 No_clan N 57 190 A
MRP-63 Family 7.6e-38 1 No_clan o 13 101 A
Ribosomal_L17 Family 3.5e-25 1 No_clan O 28 125 A
Ribosomal_L18p Family 0.000000017 1 CL0267 P 58 168 AB
CR6_interact Family 3.4e-41 1 No_clan q 25 152 A
Ribosomal_L19 Family 7.5e-18 1 CL0107 Q 93 217 A
Ribosomal_L20 Family 1.5e-36 1 No_clan R 11 116 A
Ribosomal_S18 Family 2.2e-16 1 No_clan r 77 128 A
PDCD9 Family 9.5e-178 1 CL0236 s 41 429 A
Ribosomal_L21p Family 7.2e-23 1 No_clan S 95 198 A
Ribosomal_L23 Family 0.000000000000037 1 No_clan U 28 107 A
ribosomal_L24 Family 0.0000000000019 1 No_clan V 91 154 A
KOW Family 0.000000021 1 CL0107 V 58 88 A
Ribosomal_L27 Family 7.6e-22 1 No_clan W 42 114 A
Ribosomal_L28 Family 0.00000078 1 No_clan X 76 138 A
MRP-L47 Family 3.5e-37 1 CL0346 Y 64 149 A
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
3j7y.pdb1.pdb:   [ download sequences in FASTA format ]
0 (protein): 
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1 (protein): 
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2 (protein): 
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3 (protein): 
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4 (protein): 
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5 (protein): 
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6 (protein): 
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7 (protein): 
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8 (protein): 
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9 (protein): 
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a (protein): 
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c (protein): 
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d (protein): 
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E (protein): 
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F (protein): 
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g (protein): 
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H (protein): 
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I (protein): 
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j (protein): 
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K (protein): 
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L (protein): 
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M (protein): 
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N (protein): 
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O (protein): 
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P (protein): 
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q (protein): 
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r (protein): 
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S (protein): 
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T (protein): 
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U (protein): 
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V (protein): 
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W (protein): 
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X (protein): 
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Y (protein): 
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Z (protein): 
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B (rna): 
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