General information
PDB ID 3JPT
Title TERNARY COMPLEX OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER AND 2'-DEOXYGUANOSINE 5'-BETA, GAMMA-FLUORO CHLORO METHYLENE TRIPHOSPHATE
PDB header TRANSFERASE/DNA
Date 2009-09-04
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.15
Kind dna
Organism HOMO SAPIENS
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3jpt.pdb A DPT 0
Biounits:
3jpt.pdb1.pdb A DPT 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
DNA_pol_B_palm Domain P06746_149-262 1.1e-39 1 CL0260 A 149 262 PT   
DNA_pol_lambd_f Domain P06746_98-147 4.5e-19 1 CL0198 A 98 147 PT   
HHH_8 Domain P06746_12-78 3.7e-18 1 CL0198 A 12 78 DT   
DNA_pol_B_thumb Family P06746_268-334 1.7e-17 1 No_clan A 268 334 T   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A=1-335 C spindle microtubule
A=1-335 C cytoplasm
A=1-335 C nucleoplasm
A=1-335 F damaged DNA binding
A=1-335 F metal ion binding
A=1-335 F lyase activity
A=1-335 F DNA-directed DNA polymerase activity
A=1-335 P DNA-dependent DNA replication
A=1-335 P anti-apoptosis
A=1-335 P cell death
A=1-335 P base-excision repair
A=1-335 P pyrimidine dimer repair
A=1-335 P response to ethanol
Sequences
Download file with secondary structure created by Stride  
3jpt.pdb1.pdb:   [ download sequences in FASTA format ]
D (dna): 
Click "SHOW" for view sequence
P (dna): 
Click "SHOW" for view sequence
T (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2019

text