General information
|
|||||
| PDB ID | 3K5M |
|
|||
| Title | CRYSTAL STRUCTURE OF E.COLI POL II-ABASIC DNA-DDGTP LT(-2, 2) TERNARY COMPLEX | ||||
| PDB header | TRANSFERASE/DNA | ||||
| Date | 2009-10-07 | ||||
| Experimental method | X-RAY DIFFRACTION | ||||
| Resolution (A) | 2.04 | ||||
| Kind | dna | ||||
| Organism | ESCHERICHIA COLI | ||||
|
|||||
|
Quick Links
|
||||||||||||||||||||
|
||||||||||||||||||||
|
Composition of PDB entry and biounits
|
|||||
| File: | Protein chains: | DNA chains: | RNA chains: | No. of models: | Action: |
| PDB entry: | |||||
| pdb3k5m.pdb | A | TP | 0 |
|
|
| Biounits: | |||||
| 3k5m.pdb1.pdb | A | TP | 1 |
|
|
|
Pfam domains
|
|||||||||||
| Name: | Type: | Domain: | E-value: | Significance: | Clan: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
DNA_pol_B
|
Family | P21189_365-765 | 4e-42 | 1 |
CL0194
|
A | 366 | 762 | PT | H-Bb S-Bb L-Bb L-Mn |
|
|
DNA_pol_B_exo1
|
Family | P21189_185-296 | 4.3e-07 | 1 |
CL0219
|
A | 185 | 296 | T |
|
|
|
DNA_pol_B_exo1
|
Family | P21189_63-168 | 5.1e-05 | 1 |
CL0219
|
A | 63 | 168 |
|
||
|
SCOP domains
|
|||||||
| No SCOP domains | |||||||
| GO terms | ||
| Protein chains: | GO type: | GO description: |
| A=1-783 | C | chromosome |
| A=1-783 | F | 3'-5'-exodeoxyribonuclease activity |
| A=1-783 | F | nucleotide binding |
| A=1-783 | F | DNA binding |
| A=1-783 | F | DNA-directed DNA polymerase activity |
| A=1-783 | P | DNA replication proofreading |
| A=1-783 | P | SOS response |
| A=1-783 | P | nucleotide-excision repair, DNA gap filling |
| A=1-783 | P | translesion synthesis |
|
Sequences
|
|
Download file with secondary structure created by Stride
|
|
3k5m.pdb1.pdb:
[
download sequences in FASTA format
]
|
|
P (dna):
Click "SHOW" for view sequence
T (dna):
Click "SHOW" for view sequence
A (protein):
Click "SHOW" for view sequence
|
|
|
