General information
PDB ID 3KMP
Title CRYSTAL STRUCTURE OF SMAD1-MH1/DNA COMPLEX
PDB header TRANSCRIPTION REGULATOR/DNA
Date 2009-11-11
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.7
Kind dna
Organism MUS MUSCULUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3kmp.pdb AB CD 0
Biounits:
3kmp.pdb1.pdb AB CD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
MH1 Domain P70340_30-131 2.5e-43 1 CL0263 A 30 131 CD  H-Bb S-Bb S-Mj L-Bb L-Mj 
MH1 Domain P70340_30-131 2.4e-43 1 CL0263 B 30 131 CD  H-Bb S-Bb S-Mj L-Bb L-Mj 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B=9-132 C cytoplasm
A/B=9-132 C nuclear inner membrane
A/B=9-132 C nucleus
A/B=9-132 C protein-containing complex
A/B=9-132 C transcription regulator complex
A/B=9-132 F co-SMAD binding
A/B=9-132 F DEAD/H-box RNA helicase binding
A/B=9-132 F DNA-binding transcription activator activity, RNA polymerase II-specific
A/B=9-132 F DNA-binding transcription factor activity
A/B=9-132 F I-SMAD binding
A/B=9-132 F identical protein binding
A/B=9-132 F metal ion binding
A/B=9-132 F primary miRNA binding
A/B=9-132 F protein kinase binding
A/B=9-132 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
A/B=9-132 F sequence-specific DNA binding
A/B=9-132 P BMP signaling pathway
A/B=9-132 P bone development
A/B=9-132 P cardiac muscle cell proliferation
A/B=9-132 P cartilage development
A/B=9-132 P cellular response to BMP stimulus
A/B=9-132 P cellular response to organic cyclic compound
A/B=9-132 P embryonic pattern specification
A/B=9-132 P gamete generation
A/B=9-132 P hindbrain development
A/B=9-132 P homeostatic process
A/B=9-132 P inflammatory response
A/B=9-132 P MAPK cascade
A/B=9-132 P mesodermal cell fate commitment
A/B=9-132 P midbrain development
A/B=9-132 P negative regulation of cell population proliferation
A/B=9-132 P osteoblast fate commitment
A/B=9-132 P positive regulation of cartilage development
A/B=9-132 P positive regulation of cell differentiation
A/B=9-132 P positive regulation of gene expression
A/B=9-132 P positive regulation of osteoblast differentiation
A/B=9-132 P positive regulation of pri-miRNA transcription by RNA polymerase II
A/B=9-132 P positive regulation of sprouting angiogenesis
A/B=9-132 P positive regulation of transcription by RNA polymerase II
A/B=9-132 P positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus
A/B=9-132 P protein phosphorylation
A/B=9-132 P regulation of transcription by RNA polymerase II
A/B=9-132 P response to drug
A/B=9-132 P SMAD protein complex assembly
A/B=9-132 P SMAD protein signal transduction
A/B=9-132 P transforming growth factor beta receptor signaling pathway
A/B=9-132 P ureteric bud development
Sequences
Download file with secondary structure created by Stride  
3kmp.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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B (protein): 
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