General information
PDB ID 3MGH
Title BINARY COMPLEX OF A DNA POLYMERASE LAMBDA LOOP MUTANT
PDB header LYASE,TRANSFERASE/DNA
Date 2010-04-06
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.4
Kind dna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3mgh.pdb AC TPDEFG 0
Biounits:
3mgh.pdb1.pdb A TPD 1
3mgh.pdb2.pdb C EFG 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
DNA_pol_B_palm Domain Q9UGP5_386-496 9.1e-36 1 CL0260 A 386 496 PT   
DNA_pol_lambd_f Domain Q9UGP5_336-384 5.4e-21 1 CL0198 A 336 384 PT   
HHH_8 Domain Q9UGP5_253-318 2.5e-18 1 CL0198 A 253 318 DT   
DNA_pol_B_palm Domain Q9UGP5_386-496 9.2e-36 1 CL0260 C 386 496 EF   
DNA_pol_lambd_f Domain Q9UGP5_336-384 5.4e-21 1 CL0198 C 336 384 EF   
HHH_8 Domain Q9UGP5_253-318 2.5e-18 1 CL0198 C 253 318 GE   
DNA_pol_B_thumb Family Q9UGP5_502-574 8e-22 1 No_clan A 502 574 TP   
DNA_pol_B_thumb Family Q9UGP5_502-574 5.1e-22 1 No_clan C 502 574 EF   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/C=242-575 C nucleus
A/C=242-575 F lyase activity
A/C=242-575 F DNA-directed DNA polymerase activity
A/C=242-575 F metal ion binding
A/C=242-575 F DNA binding
A/C=242-575 P DNA replication
A/C=242-575 P somatic hypermutation of immunoglobulin genes
A/C=242-575 P nucleotide-excision repair
Sequences
Download file with secondary structure created by Stride  
3mgh.pdb1.pdb:   [ download sequences in FASTA format ]
D (dna): 
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P (dna): 
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T (dna): 
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A (protein): 
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3mgh.pdb2.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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G (dna): 
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C (protein): 
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