General information
PDB ID 3MLP
Title EARLY B-CELL FACTOR 1 (EBF1) BOUND TO DNA
PDB header TRANSCRIPTION/DNA
Date 2010-04-17
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.8
Kind dna
Organism MUS MUSCULUS, SYNTHETIC CONSTRUCT
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3mlp.pdb ABEF CDGH 0
Biounits:
3mlp.pdb1.pdb AB CD 1
3mlp.pdb2.pdb EF GH 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
COE1_DBD Domain Q07802_36-247 2.2e-140 1 No_clan A 36 247 CD   
TIG Domain Q07802_262-344 2.1e-12 1 CL0159 A 255 337   
COE1_HLH Domain Q07802_349-390 4.2e-12 1 No_clan A 337 383   
COE1_DBD Domain Q07802_35-241 1.8e-138 1 No_clan B 36 255 CD   
COE1_HLH Domain Q07802_349-390 1.3e-18 1 No_clan B 340 383   
TIG Domain Q07802_262-344 2.1e-12 1 CL0159 B 255 337   
COE1_DBD Domain Q07802_36-247 1.6e-140 1 No_clan E 36 247 GH  H-Bb H-Mn S-Bb S-Mj L-Bb L-Mj L-Mn 
TIG Domain Q07802_262-344 1.7e-12 1 CL0159 E 255 337   
COE1_DBD Domain Q07802_35-241 3.4e-138 1 No_clan F 36 255 GH  H-Bb H-Mn S-Bb S-Mj L-Bb L-Mj L-Mn 
TIG Domain Q07802_262-344 1.7e-12 1 CL0159 F 255 337   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B/E/F=24-421 C nucleoplasm
A/B/E/F=24-421 F DNA binding
A/B/E/F=24-421 F sequence-specific DNA binding transcription factor activity
A/B/E/F=24-421 F metal ion binding
A/B/E/F=24-421 P transcription, DNA-dependent
A/B/E/F=24-421 P multicellular organismal development
A/B/E/F=24-421 P positive regulation of transcription, DNA-dependent
Sequences
Download file with secondary structure created by Stride  
3mlp.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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B (protein): 
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3mlp.pdb2.pdb:   [ download sequences in FASTA format ]
G (dna): 
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H (dna): 
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E (protein): 
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F (protein): 
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