General information
PDB ID 3NMU
Title CRYSTAL STRUCTURE OF SUBSTRATE-BOUND HALFMER BOX C/D RNP
PDB header TRANSFERASE/RNA
Date 2010-06-22
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.73
Kind rna
Organism PYROCOCCUS FURIOSUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb3nmu.pdb ABCFGJ DEIK 0
Biounits:
3nmu.pdb1.pdb AFG DI 1
3nmu.pdb2.pdb BCJ EK 1
3nmu.pdb3.pdb ABCFGJ DEIK 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ribosomal_L7Ae Domain Q8U160_17-111 3e-32 1 CL0101 C 18 112 EK   
Ribosomal_L7Ae Domain Q8U160_17-111 3e-32 1 CL0101 C 18 112 EK   
Ribosomal_L7Ae Domain Q8U160_17-111 3e-32 1 CL0101 C 18 112 EK   
Ribosomal_L7Ae Domain Q8U160_17-111 3e-32 1 CL0101 C 18 112 EK   
Fibrillarin Domain Q8U4M2_4-227 2.6e-102 1 CL0063 F 4 227   
Fibrillarin Domain Q8U4M2_4-227 2.6e-102 1 CL0063 F 4 227   
Fibrillarin Domain Q8U4M2_4-227 2.6e-102 1 CL0063 F 4 227   
Fibrillarin Domain Q8U4M2_4-227 2.6e-102 1 CL0063 F 4 227   
Ribosomal_L7Ae Domain Q8U160_17-111 3e-32 1 CL0101 G 18 112 D   
Ribosomal_L7Ae Domain Q8U160_17-111 3e-32 1 CL0101 G 18 112 D   
Ribosomal_L7Ae Domain Q8U160_17-111 3e-32 1 CL0101 G 18 112 D   
Ribosomal_L7Ae Domain Q8U160_17-111 3e-32 1 CL0101 G 18 112 D   
Fibrillarin Domain Q8U4M2_4-227 2.6e-102 1 CL0063 J 4 227   
Fibrillarin Domain Q8U4M2_4-227 2.6e-102 1 CL0063 J 4 227   
Fibrillarin Domain Q8U4M2_4-227 2.6e-102 1 CL0063 J 4 227   
Fibrillarin Domain Q8U4M2_4-227 2.6e-102 1 CL0063 J 4 227   
Nop Family Q8U4M1_137-364 1.3e-71 1 No_clan A 141 368 DI   
Nop Family Q8U4M1_137-364 1.3e-71 1 No_clan A 141 368 DI   
Nop Family Q8U4M1_137-364 1.3e-71 1 No_clan A 141 368 DI   
Nop Family Q8U4M1_137-364 1.3e-71 1 No_clan A 141 368 DI   
Nop Family Q8U4M1_137-364 1.3e-71 1 No_clan B 141 368 EK   
Nop Family Q8U4M1_137-364 1.3e-71 1 No_clan B 141 368 EK   
Nop Family Q8U4M1_137-364 1.3e-71 1 No_clan B 141 368 EK   
Nop Family Q8U4M1_137-364 1.3e-71 1 No_clan B 141 368 EK   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
C/G=3-123 C ribosome
C/G=3-123 F structural constituent of ribosome
C/G=3-123 P translation
C/G=3-123 P ribosome biogenesis
F/J=1-227 F RNA binding
F/J=1-227 F methyltransferase activity
F/J=1-227 P rRNA processing
F/J=1-227 P tRNA processing
Sequences
Download file with secondary structure created by Stride  
3nmu.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
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F (protein): 
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G (protein): 
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D (rna): 
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I (rna): 
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3nmu.pdb2.pdb:   [ download sequences in FASTA format ]
B (protein): 
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C (protein): 
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J (protein): 
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E (rna): 
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K (rna): 
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3nmu.pdb3.pdb:   [ download sequences in FASTA format ]
A (protein): 
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B (protein): 
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C (protein): 
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F (protein): 
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G (protein): 
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J (protein): 
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D (rna): 
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E (rna): 
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I (rna): 
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K (rna): 
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